Factsheet for Bra020282.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09249	Canola	cytosol	97.69	97.69
Bra006690.1-P	Field mustard	cytosol	94.91	94.91
Solyc06g005350.2.1	Tomato	cytosol	62.5	93.75
AT5G59840.1	Thale cress	cytosol	93.52	93.52
Bra002527.1-P	Field mustard	cytosol	92.59	92.59
Bra033830.1-P	Field mustard	cytosol	81.94	91.71
VIT_06s0004g04200.t01	Wine grape	cytosol	91.67	91.67
KRH29838	Soybean	endoplasmic reticulum	90.74	91.59
Bra019475.1-P	Field mustard	cytosol	91.2	91.2
KRH24835	Soybean	cytosol	90.28	91.12
PGSC0003DMT400040138	Potato	cytosol	88.89	88.89
KRH10292	Soybean	cytosol	87.96	88.37
PGSC0003DMT400008917	Potato	cytosol	87.96	87.96
Solyc11g073050.1.1	Tomato	endoplasmic reticulum	87.96	87.96
KRH23030	Soybean	endoplasmic reticulum	87.5	87.91
GSMUA_Achr11P...	Banana	cytosol	87.04	87.04
EES19652	Sorghum	cytosol	86.57	86.98
Zm00001d010538_P005	Maize	cytosol	86.57	86.98
Zm00001d038380_P001	Maize	extracellular, plasma membrane	86.57	86.98
GSMUA_Achr9P03220_001	Banana	cytosol	86.57	86.57
GSMUA_Achr10P...	Banana	cytosol	86.57	86.57
Os05t0461300-01	Rice	plastid	86.57	86.57
Zm00001d034638_P001	Maize	cytosol	86.11	86.51
Os03t0819900-01	Rice	plasma membrane	85.65	86.45
GSMUA_Achr6P34270_001	Banana	cytosol	86.11	86.11
Os07t0239400-01	Rice	plasma membrane	85.65	86.05
EER93195	Sorghum	cytosol	85.19	85.98
GSMUA_AchrUn_...	Banana	cytosol	85.65	85.65
TraesCS1B01G295600.1	Wheat	cytosol	84.72	85.51
TraesCS1A01G286200.1	Wheat	cytosol	84.72	85.51
TraesCS1D01G285200.1	Wheat	cytosol	84.72	85.51
GSMUA_Achr10P...	Banana	cytosol	85.19	85.19
TraesCS5D01G489700.1	Wheat	cytosol	84.26	85.05
TraesCS5B01G489300.1	Wheat	golgi	84.26	85.05
TraesCS5A01G476400.1	Wheat	cytosol	83.8	84.58
TraesCS3B01G388900.1	Wheat	cytosol	84.26	84.26
TraesCS3A01G356000.3	Wheat	plastid	84.26	84.26
GSMUA_Achr8P02620_001	Banana	cytosol	84.26	84.26
OQU88745	Sorghum	cytosol	85.19	81.42
Bra005767.1-P	Field mustard	cytosol	81.48	81.11
HORVU1Hr1G072070.1	Barley	cytosol	83.33	80.0
Bra029803.1-P	Field mustard	cytosol	80.09	76.55
TraesCS3D01G350000.3	Wheat	cytosol	84.26	76.47
Bra003149.1-P	Field mustard	cytosol	90.74	72.86
HORVU5Hr1G112790.2	Barley	cytosol, extracellular	77.31	64.48
Bra024956.1-P	Field mustard	cytosol	56.02	59.9
Bra017497.1-P	Field mustard	cytosol	55.56	59.41
Bra012658.1-P	Field mustard	cytosol	55.56	59.41
Bra022113.1-P	Field mustard	cytosol	55.56	59.41
HORVU3Hr1G086830.7	Barley	cytosol	72.22	58.87
Bra038676.1-P	Field mustard	vacuole	55.09	57.77
Bra001418.1-P	Field mustard	cytosol, extracellular	55.09	57.77
Bra038265.1-P	Field mustard	cytosol	92.59	53.19
Bra040162.1-P	Field mustard	cytosol	54.63	43.07
Bra011645.1-P	Field mustard	cytosol	41.67	42.65
Bra017733.1-P	Field mustard	cytosol	41.2	42.18
Bra021065.1-P	Field mustard	cytosol	40.74	41.9
Bra026231.1-P	Field mustard	cytosol	40.74	41.71

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra020282	EnsemblPlants:Bra020282.1	EnsemblPlants:Bra020282.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4DUT9	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF826	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025435F8	SEG:seg

Description

AT3G46060 (E=7e-094) ARA3 | ATRAB8A; GTP binding

Coordinates

chrA02:+:6007950..6009776

Molecular Weight (calculated)

24030.4 Da

IEP (calculated)

6.016

GRAVY (calculated)

-0.356

Length

216 amino acids

Sequence
(BLAST)

001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD DKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: TSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TSRGQALADE YGIKFFETSA RTNLNVEEVF FSLAKDIKQR LTDTDSRAEP ATVRMSQTDQ
201: ASGSGQATQN SACCGT

Best Arabidopsis Sequence Match ( AT3G46060.1 )
(BLAST)

001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR LSDTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGT

Arabidopsis Description

RABE1CRABE1c [Source:UniProtKB/TrEMBL;Acc:A0A178VAR9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.