Factsheet for Bra003149.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52746	Canola	cytosol	100.0	100.0
AT3G53610.3	Thale cress	cytosol	76.95	95.83
Bra006690.1-P	Field mustard	cytosol	76.21	94.91
Bra002527.1-P	Field mustard	cytosol	75.09	93.52
Bra019475.1-P	Field mustard	cytosol	74.72	93.06
VIT_08s0040g02490.t01	Wine grape	cytosol	74.35	92.59
CDY07577	Canola	cytosol	91.82	92.51
Bra033830.1-P	Field mustard	cytosol	66.17	92.23
PGSC0003DMT400022823	Potato	cytosol	73.98	92.13
Solyc09g010370.2.1	Tomato	extracellular, plastid	73.98	92.13
Bra020282.1-P	Field mustard	cytosol	72.86	90.74
PGSC0003DMT400049296	Potato	cytosol	72.49	90.28
GSMUA_Achr6P34270_001	Banana	cytosol	72.12	89.81
GSMUA_Achr10P...	Banana	cytosol	72.12	89.81
Os07t0239400-01	Rice	plasma membrane	71.75	89.77
Os03t0819900-01	Rice	plasma membrane	71.38	89.72
Os05t0461300-01	Rice	plastid	71.75	89.35
GSMUA_Achr9P03220_001	Banana	cytosol	71.75	89.35
GSMUA_Achr11P...	Banana	cytosol	71.75	89.35
Solyc10g086350.1.1	Tomato	cytosol, nucleus	71.75	89.35
Zm00001d038380_P001	Maize	extracellular, plasma membrane	71.38	89.3
Zm00001d010538_P005	Maize	cytosol	71.38	89.3
EES19652	Sorghum	cytosol	71.38	89.3
EER93195	Sorghum	cytosol	70.63	88.78
GSMUA_AchrUn_...	Banana	cytosol	71.0	88.43
Zm00001d034638_P001	Maize	cytosol	70.63	88.37
TraesCS1D01G285200.1	Wheat	cytosol	69.89	87.85
TraesCS1B01G295600.1	Wheat	cytosol	69.89	87.85
TraesCS1A01G286200.1	Wheat	cytosol	69.89	87.85
GSMUA_Achr10P...	Banana	cytosol	70.26	87.5
GSMUA_Achr8P02620_001	Banana	cytosol	70.26	87.5
TraesCS3B01G388900.1	Wheat	cytosol	69.89	87.04
TraesCS3A01G356000.3	Wheat	plastid	69.89	87.04
TraesCS5B01G489300.1	Wheat	golgi	68.77	86.45
TraesCS5A01G476400.1	Wheat	cytosol	68.4	85.98
TraesCS5D01G489700.1	Wheat	cytosol	68.03	85.51
OQU88745	Sorghum	cytosol	71.0	84.51
Bra005767.1-P	Field mustard	cytosol	67.66	83.87
HORVU1Hr1G072070.1	Barley	cytosol	67.29	80.44
Bra029803.1-P	Field mustard	cytosol	66.54	79.2
TraesCS3D01G350000.3	Wheat	cytosol	69.89	78.99
HORVU5Hr1G112790.2	Barley	cytosol, extracellular	65.06	67.57
HORVU3Hr1G086830.7	Barley	cytosol	60.59	61.51
Bra024956.1-P	Field mustard	cytosol	45.35	60.4
Bra022113.1-P	Field mustard	cytosol	44.98	59.9
Bra017497.1-P	Field mustard	cytosol	44.98	59.9
Bra012658.1-P	Field mustard	cytosol	44.98	59.9
Bra001418.1-P	Field mustard	cytosol, extracellular	43.49	56.8
Bra038676.1-P	Field mustard	vacuole	43.49	56.8
Bra038265.1-P	Field mustard	cytosol	78.07	55.85
Bra040162.1-P	Field mustard	cytosol	44.61	43.8
Bra011645.1-P	Field mustard	cytosol	33.09	42.18
Bra021065.1-P	Field mustard	cytosol	32.71	41.9
Bra017733.1-P	Field mustard	cytosol	32.71	41.71
Bra026231.1-P	Field mustard	cytosol	32.71	41.71

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra003149	EnsemblPlants:Bra003149.1	EnsemblPlants:Bra003149.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0016020
GO:GO:0016787	UniProt:M4CG17	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF642	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025413BD
SEG:seg	:	:	:	:	:

Description

AT3G53610 (E=1e-102) ATRAB8 | ATRAB8; GTP binding

Coordinates

chrA07:-:11583140..11585477

Molecular Weight (calculated)

29668.2 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.332

Length

269 amino acids

Sequence
(BLAST)

001: MTLQEAILSY PKTCTESTAE HGDWVVSEGR VGPRPAVQGP RPTQISIQRY LLAMAAPPAR GRADYDYLIK LLLIGDSGVG KSCLLLRFSD GSFTTSFITT
101: IGIDFKIRTI ELDGKRIKLQ IWDTAGQERF RTITTAYYRG AMGILLVYDV TDESSFNNIR NWIRNIEQHA SDNVNKILVG NKADMDESKR AVPTSKGQAL
201: ADEYGIKFFE TSAKTNLNVE EVFFSIGKDI KQRLADTDAR AEPHTITINQ SDQGAAGTSQ ATQKSACCG

Best Arabidopsis Sequence Match ( AT3G53610.1 )
(BLAST)

001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
201: GAGTSQATQK SACCGT

Arabidopsis Description

RABE1ARas-related protein RABE1a [Source:UniProtKB/Swiss-Prot;Acc:O24466]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.