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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72056 Canola cytosol 45.32 96.8
AT3G53610.3 Thale cress cytosol 77.9 96.3
CDY71506 Canola cytosol 76.78 94.91
CDX68365 Canola cytosol 76.78 94.91
CDX86045 Canola cytosol 76.78 94.91
CDY31592 Canola cytosol 76.4 94.44
CDY30926 Canola cytosol 76.4 94.44
CDX88726 Canola cytosol 76.03 93.98
CDX88725 Canola cytosol 76.03 93.98
VIT_08s0040g02490.t01 Wine grape cytosol 75.28 93.06
CDX77855 Canola cytosol 75.28 93.06
Solyc09g010370.2.1 Tomato extracellular, plastid 74.91 92.59
PGSC0003DMT400022823 Potato cytosol 74.91 92.59
CDX80224 Canola cytosol 73.41 92.02
CDY52746 Canola cytosol 92.51 91.82
Bra003149.1-P Field mustard cytosol 92.51 91.82
PGSC0003DMT400049296 Potato cytosol 73.41 90.74
CDY09249 Canola cytosol 73.03 90.28
GSMUA_Achr6P34270_001 Banana cytosol 73.03 90.28
GSMUA_Achr10P... Banana cytosol 73.03 90.28
Os07t0239400-01 Rice plasma membrane 72.66 90.23
Os03t0819900-01 Rice plasma membrane 72.28 90.19
Os05t0461300-01 Rice plastid 72.66 89.81
GSMUA_Achr9P03220_001 Banana cytosol 72.66 89.81
GSMUA_Achr11P... Banana cytosol 72.66 89.81
Solyc10g086350.1.1 Tomato cytosol, nucleus 72.66 89.81
EES19652 Sorghum cytosol 72.28 89.77
Zm00001d010538_P005 Maize cytosol 72.28 89.77
Zm00001d038380_P001 Maize extracellular, plasma membrane 72.28 89.77
EER93195 Sorghum cytosol 71.54 89.25
GSMUA_AchrUn_... Banana cytosol 71.91 88.89
Zm00001d034638_P001 Maize cytosol 71.54 88.84
TraesCS1A01G286200.1 Wheat cytosol 70.79 88.32
TraesCS1B01G295600.1 Wheat cytosol 70.79 88.32
TraesCS1D01G285200.1 Wheat cytosol 70.79 88.32
GSMUA_Achr8P02620_001 Banana cytosol 71.16 87.96
GSMUA_Achr10P... Banana cytosol 71.16 87.96
TraesCS3A01G356000.3 Wheat plastid 70.79 87.5
TraesCS3B01G388900.1 Wheat cytosol 70.79 87.5
TraesCS5B01G489300.1 Wheat golgi 69.66 86.92
TraesCS5A01G476400.1 Wheat cytosol 69.29 86.45
TraesCS5D01G489700.1 Wheat cytosol 68.91 85.98
OQU88745 Sorghum cytosol 71.91 84.96
CDY11256 Canola cytosol 68.54 84.33
CDY41572 Canola cytosol 67.79 83.03
CDY54609 Canola cytosol 67.79 83.03
CDX80871 Canola cytosol 68.54 82.06
HORVU1Hr1G072070.1 Barley cytosol 68.16 80.89
CDY34032 Canola cytosol 44.19 80.27
TraesCS3D01G350000.3 Wheat cytosol 70.79 79.41
CDY70243 Canola cytosol 43.82 76.97
CDX94925 Canola cytosol 44.19 71.95
CDX99131 Canola cytosol 79.03 68.51
HORVU5Hr1G112790.2 Barley cytosol, extracellular 66.29 68.34
HORVU3Hr1G086830.7 Barley cytosol 61.42 61.89
CDY65880 Canola cytosol 46.07 60.89
CDX76566 Canola cytosol 46.07 60.89
CDY33521 Canola cytosol 45.69 60.4
CDX77748 Canola cytosol 45.69 60.4
CDY43436 Canola cytosol 45.32 59.9
CDX90468 Canola cytosol 45.32 59.9
CDY40564 Canola cytosol 45.32 59.9
CDY28967 Canola cytosol 45.32 59.9
CDY67887 Canola cytosol 45.32 59.61
CDY47919 Canola vacuole 43.82 56.8
CDX73855 Canola cytosol 43.82 56.8
CDY56593 Canola cytosol 43.82 56.8
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 44.94 56.34
CDY38404 Canola endoplasmic reticulum 45.32 55.25
CDY38055 Canola cytosol 46.82 52.74
CDX85225 Canola cytosol 30.71 51.9
CDY09621 Canola cytosol 44.19 48.56
CDX75535 Canola cytosol 33.33 42.18
CDX69177 Canola cytosol 33.33 42.18
CDY58166 Canola cytosol 32.96 41.9
CDY50126 Canola cytosol 32.96 41.9
CDY09641 Canola cytosol 32.96 41.71
CDY35596 Canola cytosol 32.96 41.71
CDY47039 Canola plasma membrane 32.96 41.71
CDY42961 Canola cytosol 32.96 41.71
CDX72559 Canola cytosol 32.96 41.71
Protein Annotations
MapMan:22.8.1.5Gene3D:3.40.50.300GO:A0A078F3E5UniProt:A0A078F3E5EnsemblPlants:CDY07577ProteinID:CDY07577
ProteinID:CDY07577.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00124659001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF642SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231
UniParc:UPI0004EE7D9ESEG:seg::::
Description
BnaC06g14870DBnaC06g14870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3E5]
Coordinates
chrLK031979:+:830817..833314
Molecular Weight (calculated)
29528.9 Da
IEP (calculated)
6.148
GRAVY (calculated)
-0.404
Length
267 amino acids
Sequence
(BLAST)
001: MDSLDHLEEP QRGSIPEHGD WVVSEGRVGP RPAVENPLTP TQISIQRNRL AMAAPPARAR ADYDYLIKLL LIGDSGVGKS CLLLRFSDGS FTTSFITTIG
101: IDFKIRTIEL DGKRIKLQIW DTAGQERFRT ITTAYYRGAM GILLVYDVTD ESSFNNIRNW IRNIEQHASD NVNKILVGNK ADMDESKRAV PTSKGQALAD
201: EYGIKFFETS AKTNLNVEEV FFSIGKDIKQ RLADTDARAE PHTITINQSD QGAAGTSQAT QKSACCG
Best Arabidopsis Sequence Match ( AT3G53610.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
201: GAGTSQATQK SACCGT
Arabidopsis Description
RABE1ARas-related protein RABE1a [Source:UniProtKB/Swiss-Prot;Acc:O24466]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.