CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41572	Canola	cytosol	98.17	98.17
Bra029803.1-P	Field mustard	cytosol	99.08	95.58
AT3G09900.1	Thale cress	cytosol	95.41	95.41
CDY11256	Canola	cytosol	94.04	94.47
CDX80871	Canola	cytosol	94.04	91.93
CDY72056	Canola	cytosol	50.46	88.0
VIT_08s0007g04750.t01	Wine grape	cytosol	85.32	86.11
CDY31592	Canola	cytosol	83.03	83.8
CDX88725	Canola	cytosol	82.57	83.33
CDX88726	Canola	cytosol	82.57	83.33
CDY30926	Canola	cytosol	82.57	83.33
CDX68365	Canola	cytosol	82.11	82.87
CDY71506	Canola	cytosol	82.11	82.87
CDX86045	Canola	cytosol	81.65	82.41
CDX77855	Canola	cytosol	81.19	81.94
CDX80224	Canola	cytosol	78.9	80.75
CDY09249	Canola	cytosol	79.36	80.09
EER98157	Sorghum	cytosol	76.61	77.31
CDY34032	Canola	cytosol	50.0	74.15
CDY70243	Canola	cytosol	49.54	71.05
CDY07577	Canola	cytosol	83.03	67.79
CDY52746	Canola	cytosol	82.57	66.91
CDX94925	Canola	cytosol	49.54	65.85
CDY65880	Canola	cytosol	54.59	58.91
CDX90468	Canola	cytosol	54.59	58.91
CDX76566	Canola	cytosol	54.59	58.91
CDX77748	Canola	cytosol	54.13	58.42
CDY33521	Canola	cytosol	54.13	58.42
CDX99131	Canola	cytosol	82.11	58.12
CDY28967	Canola	cytosol	53.67	57.92
CDY40564	Canola	cytosol	53.67	57.92
CDY43436	Canola	cytosol	53.67	57.92
CDY67887	Canola	cytosol	53.67	57.64
CDY47919	Canola	vacuole	54.13	57.28
Os07t0195100-01	Rice	plasma membrane	71.56	57.14
CDY56593	Canola	cytosol	53.21	56.31
CDX73855	Canola	cytosol	53.21	56.31
CDY52557	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	53.21	54.46
CDY38404	Canola	endoplasmic reticulum	53.67	53.42
CDY38055	Canola	cytosol	55.5	51.05
CDX85225	Canola	cytosol	34.4	47.47
CDY09621	Canola	cytosol	52.75	47.33
CDX69177	Canola	cytosol	40.37	41.71
CDX75535	Canola	cytosol	40.37	41.71
CDY47039	Canola	plasma membrane	39.91	41.23
CDX72559	Canola	cytosol	39.91	41.23
CDY50126	Canola	cytosol	38.99	40.48
CDY58166	Canola	cytosol	38.99	40.48
CDY42961	Canola	cytosol	38.99	40.28
CDY09641	Canola	cytosol	38.99	40.28
CDY35596	Canola	cytosol	38.99	40.28

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	GO:A0A078IZ47	UniProt:A0A078IZ47	EnsemblPlants:CDY54609	ProteinID:CDY54609
ProteinID:CDY54609.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00014347001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF646	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI0004EE30AE	SEG:seg	:	:	:	:

Description

BnaA05g28640DBnaA05g28640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ47]

Coordinates

chrLK033334:-:36792..38602

Molecular Weight (calculated)

24271.9 Da

IEP (calculated)

8.760

GRAVY (calculated)

-0.372

Length

218 amino acids

Sequence
(BLAST)

001: MAAAPGRARS DYDYLVKLLL IGDSGVGKSC LLLRFSDDTF TTSFITTIGI DFKIRTVELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWM KNIEQHASDS VNRILVGNKA DMDESKRAIP TSKGQALADE YGIKFFETSA KTNLNVEQVF MSIAKDIKQR LTESDTKAEP QGIKIKKQDA
201: SKASSSSTTE KSACCSYV

Best Arabidopsis Sequence Match ( AT3G09900.1 )
(BLAST)

001: MAVAPARARS DYDYLIKLLL IGDSGVGKSC LLLRFSDDTF TTSFITTIGI DFKIRTVELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWM KNIEQHASDS VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNQNVEQVF LSIAKDIKQR LTESDTKAEP QGIKITKQDA
201: NKASSSSTNE KSACCSYV

Arabidopsis Description

RABE1ERas-related protein RABE1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SF91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.