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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003149.1-P Field mustard cytosol 100.0 100.0
CDY72056 Canola cytosol 45.35 97.6
AT3G53610.3 Thale cress cytosol 76.95 95.83
CDY71506 Canola cytosol 75.84 94.44
CDX88726 Canola cytosol 75.84 94.44
CDX88725 Canola cytosol 75.84 94.44
CDX86045 Canola cytosol 75.84 94.44
CDX68365 Canola cytosol 75.84 94.44
CDY31592 Canola cytosol 75.46 93.98
CDY30926 Canola cytosol 75.46 93.98
CDX77855 Canola cytosol 74.72 93.06
VIT_08s0040g02490.t01 Wine grape cytosol 74.35 92.59
CDY07577 Canola cytosol 91.82 92.51
PGSC0003DMT400022823 Potato cytosol 73.98 92.13
Solyc09g010370.2.1 Tomato extracellular, plastid 73.98 92.13
CDX80224 Canola cytosol 72.49 91.55
PGSC0003DMT400049296 Potato cytosol 72.49 90.28
CDY09249 Canola cytosol 72.12 89.81
GSMUA_Achr6P34270_001 Banana cytosol 72.12 89.81
GSMUA_Achr10P... Banana cytosol 72.12 89.81
Os07t0239400-01 Rice plasma membrane 71.75 89.77
Os03t0819900-01 Rice plasma membrane 71.38 89.72
GSMUA_Achr9P03220_001 Banana cytosol 71.75 89.35
GSMUA_Achr11P... Banana cytosol 71.75 89.35
Os05t0461300-01 Rice plastid 71.75 89.35
Solyc10g086350.1.1 Tomato cytosol, nucleus 71.75 89.35
EES19652 Sorghum cytosol 71.38 89.3
Zm00001d010538_P005 Maize cytosol 71.38 89.3
Zm00001d038380_P001 Maize extracellular, plasma membrane 71.38 89.3
EER93195 Sorghum cytosol 70.63 88.78
GSMUA_AchrUn_... Banana cytosol 71.0 88.43
Zm00001d034638_P001 Maize cytosol 70.63 88.37
TraesCS1B01G295600.1 Wheat cytosol 69.89 87.85
TraesCS1A01G286200.1 Wheat cytosol 69.89 87.85
TraesCS1D01G285200.1 Wheat cytosol 69.89 87.85
GSMUA_Achr8P02620_001 Banana cytosol 70.26 87.5
GSMUA_Achr10P... Banana cytosol 70.26 87.5
TraesCS3A01G356000.3 Wheat plastid 69.89 87.04
TraesCS3B01G388900.1 Wheat cytosol 69.89 87.04
TraesCS5B01G489300.1 Wheat golgi 68.77 86.45
TraesCS5A01G476400.1 Wheat cytosol 68.4 85.98
TraesCS5D01G489700.1 Wheat cytosol 68.03 85.51
OQU88745 Sorghum cytosol 71.0 84.51
CDY11256 Canola cytosol 67.66 83.87
CDY54609 Canola cytosol 66.91 82.57
CDY41572 Canola cytosol 66.91 82.57
CDX80871 Canola cytosol 67.66 81.61
HORVU1Hr1G072070.1 Barley cytosol 67.29 80.44
CDY34032 Canola cytosol 43.87 80.27
TraesCS3D01G350000.3 Wheat cytosol 69.89 78.99
CDY70243 Canola cytosol 43.49 76.97
CDX94925 Canola cytosol 43.87 71.95
CDX99131 Canola cytosol 78.07 68.18
HORVU5Hr1G112790.2 Barley cytosol, extracellular 65.06 67.57
HORVU3Hr1G086830.7 Barley cytosol 60.59 61.51
CDY65880 Canola cytosol 45.72 60.89
CDX76566 Canola cytosol 45.72 60.89
CDY33521 Canola cytosol 45.35 60.4
CDX77748 Canola cytosol 45.35 60.4
CDY28967 Canola cytosol 44.98 59.9
CDY43436 Canola cytosol 44.98 59.9
CDY40564 Canola cytosol 44.98 59.9
CDX90468 Canola cytosol 44.98 59.9
CDY67887 Canola cytosol 44.98 59.61
CDX73855 Canola cytosol 43.49 56.8
CDY47919 Canola vacuole 43.49 56.8
CDY56593 Canola cytosol 43.49 56.8
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 44.61 56.34
CDY38404 Canola endoplasmic reticulum 44.98 55.25
CDY38055 Canola cytosol 46.47 52.74
CDX85225 Canola cytosol 30.48 51.9
CDY09621 Canola cytosol 43.87 48.56
CDX75535 Canola cytosol 33.09 42.18
CDX69177 Canola cytosol 33.09 42.18
CDY58166 Canola cytosol 32.71 41.9
CDY50126 Canola cytosol 32.71 41.9
CDY09641 Canola cytosol 32.71 41.71
CDY47039 Canola plasma membrane 32.71 41.71
CDY42961 Canola cytosol 32.71 41.71
CDX72559 Canola cytosol 32.71 41.71
CDY35596 Canola cytosol 32.71 41.71
Protein Annotations
MapMan:22.8.1.5Gene3D:3.40.50.300GO:A0A078ISA8UniProt:A0A078ISA8EnsemblPlants:CDY52746ProteinID:CDY52746
ProteinID:CDY52746.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00007689001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF642SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231
UniParc:UPI00025413BDSEG:seg::::
Description
BnaA07g37610DBnaA07g37610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISA8]
Coordinates
chrLK033124:+:7237..9768
Molecular Weight (calculated)
29668.2 Da
IEP (calculated)
7.382
GRAVY (calculated)
-0.332
Length
269 amino acids
Sequence
(BLAST)
001: MTLQEAILSY PKTCTESTAE HGDWVVSEGR VGPRPAVQGP RPTQISIQRY LLAMAAPPAR GRADYDYLIK LLLIGDSGVG KSCLLLRFSD GSFTTSFITT
101: IGIDFKIRTI ELDGKRIKLQ IWDTAGQERF RTITTAYYRG AMGILLVYDV TDESSFNNIR NWIRNIEQHA SDNVNKILVG NKADMDESKR AVPTSKGQAL
201: ADEYGIKFFE TSAKTNLNVE EVFFSIGKDI KQRLADTDAR AEPHTITINQ SDQGAAGTSQ ATQKSACCG
Best Arabidopsis Sequence Match ( AT3G53610.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
201: GAGTSQATQK SACCGT
Arabidopsis Description
RABE1ARas-related protein RABE1a [Source:UniProtKB/Swiss-Prot;Acc:O24466]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.