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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88725 Canola cytosol 100.0 100.0
Bra006690.1-P Field mustard cytosol 99.54 99.54
CDY72056 Canola cytosol 56.48 97.6
AT5G59840.1 Thale cress cytosol 96.76 96.76
CDY31592 Canola cytosol 96.3 96.3
CDY71506 Canola cytosol 95.83 95.83
CDX86045 Canola cytosol 95.83 95.83
CDX68365 Canola cytosol 95.83 95.83
CDY30926 Canola cytosol 95.37 95.37
CDX77855 Canola cytosol 94.44 94.44
KRH29838 Soybean endoplasmic reticulum 93.06 93.93
Solyc06g005350.2.1 Tomato cytosol 62.5 93.75
VIT_06s0004g04200.t01 Wine grape cytosol 93.52 93.52
KRH24835 Soybean cytosol 92.59 93.46
CDX80224 Canola cytosol 92.13 93.43
CDY09249 Canola cytosol 93.06 93.06
KRH10292 Soybean cytosol 91.2 91.63
PGSC0003DMT400040138 Potato cytosol 91.2 91.2
KRH23030 Soybean endoplasmic reticulum 90.74 91.16
PGSC0003DMT400008917 Potato cytosol 90.74 90.74
Solyc11g073050.1.1 Tomato endoplasmic reticulum 90.28 90.28
Os03t0819900-01 Rice plasma membrane 88.43 89.25
Os05t0461300-01 Rice plastid 88.89 88.89
GSMUA_Achr10P... Banana cytosol 88.89 88.89
GSMUA_Achr11P... Banana cytosol 88.89 88.89
GSMUA_Achr9P03220_001 Banana cytosol 88.89 88.89
GSMUA_Achr6P34270_001 Banana cytosol 88.89 88.89
Os07t0239400-01 Rice plasma membrane 88.43 88.84
Zm00001d034638_P001 Maize cytosol 88.43 88.84
EER93195 Sorghum cytosol 87.96 88.78
GSMUA_AchrUn_... Banana cytosol 88.43 88.43
EES19652 Sorghum cytosol 87.96 88.37
Zm00001d010538_P005 Maize cytosol 87.96 88.37
Zm00001d038380_P001 Maize extracellular, plasma membrane 87.96 88.37
TraesCS1D01G285200.1 Wheat cytosol 86.57 87.38
TraesCS1B01G295600.1 Wheat cytosol 86.57 87.38
TraesCS1A01G286200.1 Wheat cytosol 86.57 87.38
TraesCS3B01G388900.1 Wheat cytosol 86.57 86.57
TraesCS3A01G356000.3 Wheat plastid 86.57 86.57
GSMUA_Achr8P02620_001 Banana cytosol 86.57 86.57
GSMUA_Achr10P... Banana cytosol 86.57 86.57
TraesCS5B01G489300.1 Wheat golgi 85.65 86.45
TraesCS5A01G476400.1 Wheat cytosol 85.19 85.98
TraesCS5D01G489700.1 Wheat cytosol 84.72 85.51
OQU88745 Sorghum cytosol 87.5 83.63
CDY11256 Canola cytosol 83.8 83.41
CDY54609 Canola cytosol 83.33 82.57
CDY41572 Canola cytosol 83.33 82.57
CDY34032 Canola cytosol 56.02 82.31
HORVU1Hr1G072070.1 Barley cytosol 84.72 81.33
CDX80871 Canola cytosol 83.8 81.17
CDY70243 Canola cytosol 55.56 78.95
TraesCS3D01G350000.3 Wheat cytosol 86.57 78.57
CDY07577 Canola cytosol 93.98 76.03
CDY52746 Canola cytosol 94.44 75.84
CDX94925 Canola cytosol 56.02 73.78
CDX99131 Canola cytosol 95.37 66.88
HORVU5Hr1G112790.2 Barley cytosol, extracellular 79.63 66.41
HORVU3Hr1G086830.7 Barley cytosol 74.54 60.75
CDX76566 Canola cytosol 56.48 60.4
CDX90468 Canola cytosol 56.48 60.4
CDY65880 Canola cytosol 56.48 60.4
CDX77748 Canola cytosol 56.02 59.9
CDY33521 Canola cytosol 56.02 59.9
CDY43436 Canola cytosol 55.56 59.41
CDY28967 Canola cytosol 55.56 59.41
CDY40564 Canola cytosol 55.56 59.41
CDY67887 Canola cytosol 55.56 59.11
CDX73855 Canola cytosol 55.09 57.77
CDY56593 Canola cytosol 55.09 57.77
CDY47919 Canola vacuole 55.09 57.77
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 55.09 55.87
CDY38404 Canola endoplasmic reticulum 55.56 54.79
CDX85225 Canola cytosol 37.96 51.9
CDY38055 Canola cytosol 56.94 51.9
CDY09621 Canola cytosol 54.63 48.56
CDY58166 Canola cytosol 41.2 42.38
CDY50126 Canola cytosol 41.2 42.38
CDX69177 Canola cytosol 41.2 42.18
CDX75535 Canola cytosol 41.2 42.18
CDY09641 Canola cytosol 41.2 42.18
CDY35596 Canola cytosol 41.2 42.18
CDY42961 Canola cytosol 41.2 42.18
CDX72559 Canola cytosol 40.74 41.71
CDY47039 Canola plasma membrane 40.74 41.71
Protein Annotations
MapMan:22.8.1.5Gene3D:3.40.50.300GO:A0A078DHQ4EnsemblPlants:CDX88726ProteinID:CDX88726ProteinID:CDX88726.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00148778001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF826SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176
SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EF4603
SEG:seg:::::
Description
BnaA03g09230D
Coordinates
chrLK031856:-:691510..693334
Molecular Weight (calculated)
23924.4 Da
IEP (calculated)
8.444
GRAVY (calculated)
-0.311
Length
216 amino acids
Sequence
(BLAST)
001: MAAPPARGRA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD TKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDK VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LTDTDSRAEP ATIRISQTDQ
201: AAGAGQATQK SACCGT
Best Arabidopsis Sequence Match ( AT3G46060.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR LSDTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGT
Arabidopsis Description
RABE1CRABE1c [Source:UniProtKB/TrEMBL;Acc:A0A178VAR9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.