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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34032 Canola cytosol 86.59 96.6
CDY70243 Canola cytosol 87.8 94.74
CDX88725 Canola cytosol 73.78 56.02
CDX88726 Canola cytosol 73.78 56.02
VIT_06s0004g04200.t01 Wine grape cytosol 73.17 55.56
AT5G59840.1 Thale cress cytosol 73.17 55.56
KRH29838 Soybean endoplasmic reticulum 71.95 55.14
CDX68365 Canola cytosol 72.56 55.09
CDY31592 Canola cytosol 72.56 55.09
CDY71506 Canola cytosol 72.56 55.09
KRH24835 Soybean cytosol 71.34 54.67
CDX86045 Canola cytosol 71.95 54.63
PGSC0003DMT400040138 Potato cytosol 71.34 54.17
Solyc11g073050.1.1 Tomato endoplasmic reticulum 71.34 54.17
CDY30926 Canola cytosol 71.34 54.17
Os07t0239400-01 Rice plasma membrane 70.73 53.95
Os03t0819900-01 Rice plasma membrane 70.12 53.74
CDY09249 Canola cytosol 70.73 53.7
PGSC0003DMT400008917 Potato cytosol 70.73 53.7
CDX77855 Canola cytosol 70.73 53.7
Zm00001d038380_P001 Maize extracellular, plasma membrane 70.12 53.49
Zm00001d034638_P001 Maize cytosol 70.12 53.49
Zm00001d010538_P005 Maize cytosol 70.12 53.49
KRH23030 Soybean endoplasmic reticulum 70.12 53.49
KRH10292 Soybean cytosol 70.12 53.49
EES19652 Sorghum cytosol 70.12 53.49
TraesCS1D01G285200.1 Wheat cytosol 69.51 53.27
TraesCS1B01G295600.1 Wheat cytosol 69.51 53.27
TraesCS1A01G286200.1 Wheat cytosol 69.51 53.27
EER93195 Sorghum cytosol 69.51 53.27
Os05t0461300-01 Rice plastid 70.12 53.24
GSMUA_Achr9P03220_001 Banana cytosol 70.12 53.24
GSMUA_Achr11P... Banana cytosol 70.12 53.24
CDX80224 Canola cytosol 68.9 53.05
GSMUA_AchrUn_... Banana cytosol 69.51 52.78
GSMUA_Achr6P34270_001 Banana cytosol 69.51 52.78
GSMUA_Achr10P... Banana cytosol 69.51 52.78
GSMUA_Achr10P... Banana cytosol 68.9 52.31
TraesCS3B01G388900.1 Wheat cytosol 68.29 51.85
TraesCS3A01G356000.3 Wheat plastid 68.29 51.85
TraesCS5B01G489300.1 Wheat golgi 67.07 51.4
TraesCS5A01G476400.1 Wheat cytosol 66.46 50.93
TraesCS5D01G489700.1 Wheat cytosol 66.46 50.93
GSMUA_Achr8P02620_001 Banana cytosol 67.07 50.93
CDY11256 Canola cytosol 67.07 50.69
OQU88745 Sorghum cytosol 69.51 50.44
CDY54609 Canola cytosol 65.85 49.54
HORVU1Hr1G072070.1 Barley cytosol 67.68 49.33
CDX80871 Canola cytosol 67.07 49.33
Solyc06g005350.2.1 Tomato cytosol 43.29 49.31
CDY41572 Canola cytosol 65.24 49.08
TraesCS3D01G350000.3 Wheat cytosol 68.9 47.48
CDY07577 Canola cytosol 71.95 44.19
CDY72056 Canola cytosol 33.54 44.0
CDY52746 Canola cytosol 71.95 43.87
HORVU5Hr1G112790.2 Barley cytosol, extracellular 65.85 41.7
HORVU3Hr1G086830.7 Barley cytosol 65.24 40.38
CDX99131 Canola cytosol 71.34 37.99
CDX76566 Canola cytosol 45.12 36.63
CDY65880 Canola cytosol 45.12 36.63
CDY47919 Canola vacuole 45.73 36.41
CDY33521 Canola cytosol 44.51 36.14
CDX77748 Canola cytosol 44.51 36.14
CDX73855 Canola cytosol 45.12 35.92
CDY56593 Canola cytosol 45.12 35.92
CDX90468 Canola cytosol 43.9 35.64
CDY43436 Canola cytosol 43.9 35.64
CDY28967 Canola cytosol 43.9 35.64
CDY40564 Canola cytosol 43.9 35.64
CDY67887 Canola cytosol 43.9 35.47
CDX85225 Canola cytosol 33.54 34.81
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 44.51 34.27
CDY38404 Canola endoplasmic reticulum 44.51 33.33
CDY38055 Canola cytosol 42.07 29.11
CDY09621 Canola cytosol 42.68 28.81
CDY50126 Canola cytosol 31.1 24.29
CDY58166 Canola cytosol 31.1 24.29
CDX69177 Canola cytosol 31.1 24.17
CDX75535 Canola cytosol 31.1 24.17
CDY09641 Canola cytosol 31.1 24.17
CDY42961 Canola cytosol 31.1 24.17
CDY35596 Canola cytosol 31.1 24.17
CDY47039 Canola plasma membrane 29.88 23.22
CDX72559 Canola cytosol 29.88 23.22
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078E009EnsemblPlants:CDX94925ProteinID:CDX94925ProteinID:CDX94925.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00100403001InterPro:P-loop_NTPasePFAM:PF00071PFscan:PS51419PANTHER:PTHR24073
PANTHER:PTHR24073:SF642SMART:SM00173SMART:SM00174SMART:SM00175SUPFAM:SSF52540InterPro:Small_GTPase
UniParc:UPI0004EEAAC2:::::
Description
BnaC05g07460D
Coordinates
chrLK031886:-:216560..218627
Molecular Weight (calculated)
18647.9 Da
IEP (calculated)
4.699
GRAVY (calculated)
-0.623
Length
164 amino acids
Sequence
(BLAST)
001: MGLGLILDST KDDEPDPYTR GYGGIDFKIR TIELDTERIK LQIWDTAGQE RFRTITTDIR NWIRNIEQHA SENVNKILVG NKADMDESKR AVPTSKGQAL
101: ADEYGIKFFE TSTKTNLNVE EVFFSIAKDI KQRLTDTDSR AEDEKKCIAG SFCDMLFIAP SDRS
Best Arabidopsis Sequence Match ( AT3G46060.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR LSDTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGT
Arabidopsis Description
RABE1CRABE1c [Source:UniProtKB/TrEMBL;Acc:A0A178VAR9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.