Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65880 | Canola | cytosol | 92.49 | 97.52 |
| CDX76566 | Canola | cytosol | 92.49 | 97.52 |
| AT4G17530.1 | Thale cress | cytosol | 91.55 | 96.53 |
| CDX90468 | Canola | cytosol | 90.61 | 95.54 |
| CDY43436 | Canola | cytosol | 90.14 | 95.05 |
| CDY28967 | Canola | cytosol | 90.14 | 95.05 |
| CDY33521 | Canola | cytosol | 90.14 | 95.05 |
| CDY40564 | Canola | cytosol | 90.14 | 95.05 |
| CDX77748 | Canola | cytosol | 90.14 | 95.05 |
| CDY67887 | Canola | cytosol | 90.14 | 94.58 |
| CDY38404 | Canola | endoplasmic reticulum | 93.43 | 90.87 |
| CDX85225 | Canola | cytosol | 67.14 | 90.51 |
| CDY09621 | Canola | cytosol | 91.08 | 79.84 |
| CDY47919 | Canola | vacuole | 70.42 | 72.82 |
| CDY56593 | Canola | cytosol | 69.95 | 72.33 |
| CDX73855 | Canola | cytosol | 69.95 | 72.33 |
| CDY38055 | Canola | cytosol | 77.93 | 70.04 |
| CDY72056 | Canola | cytosol | 37.56 | 64.0 |
| CDX68365 | Canola | cytosol | 57.75 | 56.94 |
| CDY71506 | Canola | cytosol | 57.75 | 56.94 |
| CDY30926 | Canola | cytosol | 57.75 | 56.94 |
| CDX77855 | Canola | cytosol | 57.28 | 56.48 |
| CDY31592 | Canola | cytosol | 57.28 | 56.48 |
| CDX86045 | Canola | cytosol | 57.28 | 56.48 |
| CDX88726 | Canola | cytosol | 55.87 | 55.09 |
| CDX88725 | Canola | cytosol | 55.87 | 55.09 |
| CDX80224 | Canola | cytosol | 54.46 | 54.46 |
| CDY11256 | Canola | cytosol | 55.4 | 54.38 |
| CDY41572 | Canola | cytosol | 54.46 | 53.21 |
| CDY54609 | Canola | cytosol | 54.46 | 53.21 |
| CDX80871 | Canola | cytosol | 55.4 | 52.91 |
| CDY09249 | Canola | cytosol | 53.52 | 52.78 |
| CDY34032 | Canola | cytosol | 33.33 | 48.3 |
| CDY70243 | Canola | cytosol | 33.33 | 46.71 |
| CDX72559 | Canola | cytosol | 44.6 | 45.02 |
| CDY07577 | Canola | cytosol | 56.34 | 44.94 |
| CDY52746 | Canola | cytosol | 56.34 | 44.61 |
| CDX75535 | Canola | cytosol | 44.13 | 44.55 |
| CDX69177 | Canola | cytosol | 44.13 | 44.55 |
| CDX94925 | Canola | cytosol | 34.27 | 44.51 |
| CDY47039 | Canola | plasma membrane | 43.66 | 44.08 |
| CDY50126 | Canola | cytosol | 43.19 | 43.81 |
| CDY58166 | Canola | cytosol | 43.19 | 43.81 |
| CDY42961 | Canola | cytosol | 42.72 | 43.13 |
| CDY09641 | Canola | cytosol | 42.72 | 43.13 |
| CDY35596 | Canola | cytosol | 42.72 | 43.13 |
| CDX99131 | Canola | cytosol | 57.28 | 39.61 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:A0A078IRG7 | UniProt:A0A078IRG7 | EnsemblPlants:CDY52557 | ProteinID:CDY52557 |
| ProteinID:CDY52557.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00007263001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0004EE153D | : | : | : | : | : |
Description
BnaC08g48160DBnaC08g48160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRG7]
Coordinates
chrLK033103:+:49855..52148
Molecular Weight (calculated)
23636.2 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.397
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESITKRGK KKRRKSDYLF KLLLIGDSGV GKSCLLLRFA DDSYLDSYIS TIGVDFKIRT VEQDGKTIKL QIWDTAGQER FRTITSSYYR GAHGIIVTYD
101: VTDQESFNNV KQWLNEIDRY ASENVNKLLV GNKCDLTSQK VVSTETAKAF ADELGIPFLE TSAKNATNVE EAFMAMTAAI KTRMASQPAG GSKPSTVQIR
201: GQPVNQQSGC CSS
101: VTDQESFNNV KQWLNEIDRY ASENVNKLLV GNKCDLTSQK VVSTETAKAF ADELGIPFLE TSAKNATNVE EAFMAMTAAI KTRMASQPAG GSKPSTVQIR
201: GQPVNQQSGC CSS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.