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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34032 Canola cytosol 94.74 97.96
CDX94925 Canola cytosol 94.74 87.8
CDX88726 Canola cytosol 78.95 55.56
CDX88725 Canola cytosol 78.95 55.56
KRH29838 Soybean endoplasmic reticulum 76.97 54.67
CDY31592 Canola cytosol 77.63 54.63
VIT_06s0004g04200.t01 Wine grape cytosol 77.63 54.63
AT5G59840.1 Thale cress cytosol 77.63 54.63
KRH24835 Soybean cytosol 76.32 54.21
CDX68365 Canola cytosol 76.97 54.17
CDY71506 Canola cytosol 76.97 54.17
CDX86045 Canola cytosol 76.32 53.7
PGSC0003DMT400040138 Potato cytosol 75.66 53.24
CDY30926 Canola cytosol 75.66 53.24
CDY09249 Canola cytosol 75.66 53.24
Solyc11g073050.1.1 Tomato endoplasmic reticulum 75.66 53.24
KRH23030 Soybean endoplasmic reticulum 75.0 53.02
Os07t0239400-01 Rice plasma membrane 75.0 53.02
KRH10292 Soybean cytosol 75.0 53.02
Os03t0819900-01 Rice plasma membrane 74.34 52.8
PGSC0003DMT400008917 Potato cytosol 75.0 52.78
CDX77855 Canola cytosol 75.0 52.78
Zm00001d034638_P001 Maize cytosol 74.34 52.56
Zm00001d010538_P005 Maize cytosol 74.34 52.56
EES19652 Sorghum cytosol 74.34 52.56
Zm00001d038380_P001 Maize extracellular, plasma membrane 74.34 52.56
EER93195 Sorghum cytosol 73.68 52.34
TraesCS1A01G286200.1 Wheat cytosol 73.68 52.34
TraesCS1B01G295600.1 Wheat cytosol 73.68 52.34
TraesCS1D01G285200.1 Wheat cytosol 73.68 52.34
Os05t0461300-01 Rice plastid 74.34 52.31
GSMUA_Achr9P03220_001 Banana cytosol 74.34 52.31
GSMUA_Achr11P... Banana cytosol 74.34 52.31
GSMUA_Achr6P34270_001 Banana cytosol 73.68 51.85
GSMUA_Achr10P... Banana cytosol 73.68 51.85
GSMUA_AchrUn_... Banana cytosol 73.68 51.85
CDX80224 Canola cytosol 72.37 51.64
GSMUA_Achr10P... Banana cytosol 73.03 51.39
TraesCS3B01G388900.1 Wheat cytosol 72.37 50.93
TraesCS3A01G356000.3 Wheat plastid 72.37 50.93
CDY11256 Canola cytosol 72.37 50.69
TraesCS5B01G489300.1 Wheat golgi 71.05 50.47
GSMUA_Achr8P02620_001 Banana cytosol 71.05 50.0
TraesCS5A01G476400.1 Wheat cytosol 70.39 50.0
TraesCS5D01G489700.1 Wheat cytosol 70.39 50.0
OQU88745 Sorghum cytosol 73.68 49.56
CDY54609 Canola cytosol 71.05 49.54
HORVU1Hr1G072070.1 Barley cytosol 73.03 49.33
CDX80871 Canola cytosol 72.37 49.33
CDY41572 Canola cytosol 70.39 49.08
Solyc06g005350.2.1 Tomato cytosol 45.39 47.92
TraesCS3D01G350000.3 Wheat cytosol 73.03 46.64
CDY07577 Canola cytosol 76.97 43.82
CDY52746 Canola cytosol 76.97 43.49
CDY72056 Canola cytosol 35.53 43.2
HORVU5Hr1G112790.2 Barley cytosol, extracellular 70.39 41.31
HORVU3Hr1G086830.7 Barley cytosol 71.05 40.75
CDX99131 Canola cytosol 75.66 37.34
CDY47919 Canola vacuole 49.34 36.41
CDY56593 Canola cytosol 48.68 35.92
CDX73855 Canola cytosol 48.68 35.92
CDX76566 Canola cytosol 47.37 35.64
CDY65880 Canola cytosol 47.37 35.64
CDX77748 Canola cytosol 46.71 35.15
CDY33521 Canola cytosol 46.71 35.15
CDY28967 Canola cytosol 46.05 34.65
CDX90468 Canola cytosol 46.05 34.65
CDY40564 Canola cytosol 46.05 34.65
CDY43436 Canola cytosol 46.05 34.65
CDY67887 Canola cytosol 46.05 34.48
CDX85225 Canola cytosol 35.53 34.18
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 46.71 33.33
CDY38404 Canola endoplasmic reticulum 46.71 32.42
CDY38055 Canola cytosol 46.05 29.54
CDY09621 Canola cytosol 44.74 27.98
CDY58166 Canola cytosol 32.89 23.81
CDY50126 Canola cytosol 32.89 23.81
CDY09641 Canola cytosol 32.89 23.7
CDY42961 Canola cytosol 32.89 23.7
CDX75535 Canola cytosol 32.89 23.7
CDY35596 Canola cytosol 32.89 23.7
CDX69177 Canola cytosol 32.89 23.7
CDY47039 Canola plasma membrane 31.58 22.75
CDX72559 Canola cytosol 31.58 22.75
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078JRP8UniProt:A0A078JRP8EnsemblPlants:CDY70243ProteinID:CDY70243
ProteinID:CDY70243.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00097604001InterPro:P-loop_NTPasePFAM:PF00071PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF642SMART:SM00173SMART:SM00174SMART:SM00175SUPFAM:SSF52540
InterPro:Small_GTPaseUniParc:UPI0004EEA097::::
Description
BnaUnng03720DBnaUnng03720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRP8]
Coordinates
chrLK041579:+:398..2229
Molecular Weight (calculated)
17415.5 Da
IEP (calculated)
5.085
GRAVY (calculated)
-0.701
Length
152 amino acids
Sequence
(BLAST)
001: MGLGLILDST KNDEPDPYTR GYGGIDFKIR TIELDTEHIK LQIWDTAGQE RFRTITTDIR NWIRNIEQHA SDNVNKILVG NKADMDESKR AVPTSKGQAL
101: ADEYGIKFFE TSAKTNLNVE EVFFSIAKDI KQRLTDTDSR AEDEKKCNRL FL
Best Arabidopsis Sequence Match ( AT3G46060.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR LSDTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGT
Arabidopsis Description
RABE1CRABE1c [Source:UniProtKB/TrEMBL;Acc:A0A178VAR9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.