Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54609 | Canola | cytosol | 98.17 | 98.17 |
| AT3G09900.1 | Thale cress | cytosol | 95.87 | 95.87 |
| CDY11256 | Canola | cytosol | 94.04 | 94.47 |
| Bra029803.1-P | Field mustard | cytosol | 97.25 | 93.81 |
| CDX80871 | Canola | cytosol | 94.04 | 91.93 |
| CDY72056 | Canola | cytosol | 50.92 | 88.8 |
| VIT_08s0007g04750.t01 | Wine grape | cytosol | 85.32 | 86.11 |
| CDY31592 | Canola | cytosol | 83.03 | 83.8 |
| CDY30926 | Canola | cytosol | 82.57 | 83.33 |
| CDX88726 | Canola | cytosol | 82.57 | 83.33 |
| CDX88725 | Canola | cytosol | 82.57 | 83.33 |
| CDX68365 | Canola | cytosol | 82.11 | 82.87 |
| CDY71506 | Canola | cytosol | 82.11 | 82.87 |
| CDX86045 | Canola | cytosol | 81.65 | 82.41 |
| CDX77855 | Canola | cytosol | 81.19 | 81.94 |
| CDY09249 | Canola | cytosol | 80.28 | 81.02 |
| CDX80224 | Canola | cytosol | 78.9 | 80.75 |
| EER98157 | Sorghum | cytosol | 76.61 | 77.31 |
| CDY34032 | Canola | cytosol | 49.54 | 73.47 |
| CDY70243 | Canola | cytosol | 49.08 | 70.39 |
| CDY07577 | Canola | cytosol | 83.03 | 67.79 |
| CDY52746 | Canola | cytosol | 82.57 | 66.91 |
| CDX94925 | Canola | cytosol | 49.08 | 65.24 |
| CDX90468 | Canola | cytosol | 55.5 | 59.9 |
| CDY40564 | Canola | cytosol | 54.59 | 58.91 |
| CDY43436 | Canola | cytosol | 54.59 | 58.91 |
| CDY28967 | Canola | cytosol | 54.59 | 58.91 |
| CDY65880 | Canola | cytosol | 54.59 | 58.91 |
| CDX76566 | Canola | cytosol | 54.59 | 58.91 |
| CDY67887 | Canola | cytosol | 54.59 | 58.62 |
| CDX77748 | Canola | cytosol | 54.13 | 58.42 |
| CDY33521 | Canola | cytosol | 54.13 | 58.42 |
| CDX99131 | Canola | cytosol | 82.11 | 58.12 |
| Os07t0195100-01 | Rice | plasma membrane | 71.56 | 57.14 |
| CDY47919 | Canola | vacuole | 53.21 | 56.31 |
| CDX73855 | Canola | cytosol | 52.29 | 55.34 |
| CDY56593 | Canola | cytosol | 52.29 | 55.34 |
| CDY52557 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 53.21 | 54.46 |
| CDY38404 | Canola | endoplasmic reticulum | 53.67 | 53.42 |
| CDY38055 | Canola | cytosol | 55.96 | 51.48 |
| CDX85225 | Canola | cytosol | 35.32 | 48.73 |
| CDY09621 | Canola | cytosol | 53.67 | 48.15 |
| CDX69177 | Canola | cytosol | 40.83 | 42.18 |
| CDX75535 | Canola | cytosol | 40.83 | 42.18 |
| CDX72559 | Canola | cytosol | 40.37 | 41.71 |
| CDY47039 | Canola | plasma membrane | 40.37 | 41.71 |
| CDY50126 | Canola | cytosol | 39.45 | 40.95 |
| CDY58166 | Canola | cytosol | 39.45 | 40.95 |
| CDY09641 | Canola | cytosol | 39.45 | 40.76 |
| CDY35596 | Canola | cytosol | 39.45 | 40.76 |
| CDY42961 | Canola | cytosol | 39.45 | 40.76 |
Protein Annotations
| MapMan:22.8.1.5 | Gene3D:3.40.50.300 | GO:A0A078HUT0 | UniProt:A0A078HUT0 | EnsemblPlants:CDY41572 | ProteinID:CDY41572 |
| ProteinID:CDY41572.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00073213001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF646 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0004EE2B68 | SEG:seg | : | : | : | : |
Description
BnaC05g43090DBnaC05g43090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUT0]
Coordinates
chrLK032501:-:20032..21968
Molecular Weight (calculated)
24356.9 Da
IEP (calculated)
8.762
GRAVY (calculated)
-0.389
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPARARS DYDYLVKLLL IGDSGVGKSC LLLRFSDDTF TTSFITTIGI DFKIRTVELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWM KNIEQHASDS VNRILVGNKA DMDESKRAIP TSKGQALADE YGIKFFETSA KTNLNVEQVF MSIAKDIKQR LTESDTKSEP QGIKIRKQDA
201: NKASSSSTTE KSACCSYV
101: SSFNNIRNWM KNIEQHASDS VNRILVGNKA DMDESKRAIP TSKGQALADE YGIKFFETSA KTNLNVEQVF MSIAKDIKQR LTESDTKSEP QGIKIRKQDA
201: NKASSSSTTE KSACCSYV
001: MAVAPARARS DYDYLIKLLL IGDSGVGKSC LLLRFSDDTF TTSFITTIGI DFKIRTVELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWM KNIEQHASDS VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNQNVEQVF LSIAKDIKQR LTESDTKAEP QGIKITKQDA
201: NKASSSSTNE KSACCSYV
101: SSFNNIRNWM KNIEQHASDS VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNQNVEQVF LSIAKDIKQR LTESDTKAEP QGIKITKQDA
201: NKASSSSTNE KSACCSYV
Arabidopsis Description
RABE1ERas-related protein RABE1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SF91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.