Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g02490.t01 | Wine grape | cytosol | 91.2 | 91.2 |
| VIT_13s0019g00520.t01 | Wine grape | extracellular | 90.28 | 90.28 |
| VIT_06s0004g04200.t01 | Wine grape | cytosol | 89.35 | 89.35 |
| AT3G09900.1 | Thale cress | cytosol | 86.57 | 85.78 |
| AT5G03520.1 | Thale cress | cytosol | 85.65 | 85.65 |
| CDY41572 | Canola | cytosol | 86.11 | 85.32 |
| CDY54609 | Canola | cytosol | 86.11 | 85.32 |
| Bra005767.1-P | Field mustard | cytosol | 85.19 | 84.79 |
| CDY11256 | Canola | cytosol | 85.19 | 84.79 |
| CDX80871 | Canola | cytosol | 85.19 | 82.51 |
| Bra029803.1-P | Field mustard | cytosol | 85.65 | 81.86 |
| EER98157 | Sorghum | cytosol | 81.02 | 81.02 |
| VIT_00s1372g00020.t01 | Wine grape | cytosol | 56.48 | 61.62 |
| VIT_16s0013g00520.t01 | Wine grape | extracellular | 56.94 | 60.59 |
| Os07t0195100-01 | Rice | plasma membrane | 75.0 | 59.34 |
| VIT_12s0035g01150.t01 | Wine grape | vacuole | 54.63 | 58.42 |
| VIT_00s0878g00030.t01 | Wine grape | cytosol | 26.39 | 55.88 |
| VIT_15s0021g01410.t01 | Wine grape | cytosol | 43.98 | 46.34 |
| VIT_12s0057g01470.t01 | Wine grape | extracellular | 41.67 | 42.65 |
| VIT_14s0066g00180.t01 | Wine grape | cytosol | 41.2 | 42.58 |
| VIT_00s1506g00010.t01 | Wine grape | cytosol | 24.07 | 34.9 |
| VIT_00s0455g00010.t01 | Wine grape | cytosol | 13.43 | 21.8 |
Protein Annotations
| EntrezGene:100257177 | wikigene:100257177 | MapMan:22.8.1.5 | Gene3D:3.40.50.300 | EMBL:AM433353 | ProteinID:CAN64837 |
| ProteinID:CAN64837.1 | ProteinID:CBI30166 | ProteinID:CBI30166.3 | UniProt:D7TIU0 | EMBL:FN595991 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0006810 |
| GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0017157 |
| EntrezGene:LOC100257177 | wikigene:LOC100257177 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF829 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGR:TC59891 | TIGR:TC60446 |
| TIGRFAMs:TIGR00231 | UniParc:UPI00015CCFBB | ArrayExpress:VIT_08s0007g04750 | EnsemblPlantsGene:VIT_08s0007g04750 | EnsemblPlants:VIT_08s0007g04750.t01 | unigene:Vvi.1408 |
| unigene:Vvi.26295 | RefSeq:XP_002267366 | RefSeq:XP_002267366.1 | RefSeq:XP_010653994.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:-:18736170..18739245
Molecular Weight (calculated)
23939.4 Da
IEP (calculated)
7.188
GRAVY (calculated)
-0.261
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPARARA DYDYLVKLLL IGDSGVGKSC LLLRFSDDSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TSQGQALADE YGIKFFETSA KTNFNVEQVF FSIARDIKQR IAESDSKAEP LTIKISKPDP
201: AIGSATAQEK SACCGS
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TSQGQALADE YGIKFFETSA KTNFNVEQVF FSIARDIKQR IAESDSKAEP LTIKISKPDP
201: AIGSATAQEK SACCGS
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGS
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGS
Arabidopsis Description
Putative GTP-binding protein ara-3 [Source:UniProtKB/TrEMBL;Acc:Q9FJF1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.