Factsheet for AT3G09900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41572	Canola	cytosol	95.87	95.87
AT5G03520.1	Thale cress	cytosol	94.95	95.83
CDY54609	Canola	cytosol	95.41	95.41
Bra029803.1-P	Field mustard	cytosol	94.5	91.15
VIT_08s0007g04750.t01	Wine grape	cytosol	85.78	86.57
AT3G53610.3	Thale cress	cytosol	84.4	85.19
AT5G59840.1	Thale cress	cytosol	83.49	84.26
AT3G46060.1	Thale cress	cytosol	82.57	83.33
EER98157	Sorghum	cytosol	77.98	78.7
AT1G02130.1	Thale cress	cytosol	56.42	60.59
AT4G17530.1	Thale cress	cytosol	55.05	59.41
AT5G47200.1	Thale cress	cytosol	55.05	59.41
Os07t0195100-01	Rice	plasma membrane	72.94	58.24
AT3G11730.1	Thale cress	cytosol	53.21	56.59
AT4G35860.1	Thale cress	cytosol	41.28	42.65
AT4G17160.1	Thale cress	cytosol	38.99	41.46
AT4G17170.1	Thale cress	cytosol	39.91	41.23

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	EntrezGene:820148	EntrezGene:831817	UniProt:A0A178V789	ProteinID:AAF23246.1
ProteinID:AED90617.1	ProteinID:AED90618.1	ProteinID:AEE74828.1	EMBL:AK229294	ArrayExpress:AT3G09900	EnsemblPlantsGene:AT3G09900
RefSeq:AT3G09900	TAIR:AT3G09900	RefSeq:AT3G09900-TAIR-G	EnsemblPlants:AT3G09900.1	TAIR:AT3G09900.1	Symbol:ATRABE1E
EMBL:AY035124	EMBL:AY056351	EMBL:AY084345	EMBL:AY087058	EMBL:BT024925	ProteinID:CAB83313.1
GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009306
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016787	GO:GO:0017157	RefSeq:NP_001031827.1
RefSeq:NP_187601.1	RefSeq:NP_195972.1	ProteinID:OAO93933.1	ProteinID:OAP01624.1	InterPro:P-loop_NTPase	PFAM:PF00071
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF646	UniProt:Q9SF91	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000005EAC2	SEG:seg	:	:

Description

RABE1ERas-related protein RABE1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SF91]

Coordinates

chr3:+:3034477..3036961

Molecular Weight (calculated)

24295.8 Da

IEP (calculated)

8.431

GRAVY (calculated)

-0.383

Length

218 amino acids

Sequence
(BLAST)

001: MAVAPARARS DYDYLIKLLL IGDSGVGKSC LLLRFSDDTF TTSFITTIGI DFKIRTVELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWM KNIEQHASDS VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNQNVEQVF LSIAKDIKQR LTESDTKAEP QGIKITKQDA
201: NKASSSSTNE KSACCSYV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.