Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G59840.1 | Thale cress | cytosol | 95.37 | 95.37 |
| AT3G46060.1 | Thale cress | cytosol | 93.52 | 93.52 |
| Solyc09g010370.2.1 | Tomato | extracellular, plastid | 92.59 | 92.59 |
| PGSC0003DMT400022823 | Potato | cytosol | 92.59 | 92.59 |
| PGSC0003DMT400049296 | Potato | cytosol | 90.74 | 90.74 |
| VIT_08s0040g02490.t01 | Wine grape | cytosol | 90.28 | 90.28 |
| Os05t0461300-01 | Rice | plastid | 89.81 | 89.81 |
| Solyc10g086350.1.1 | Tomato | cytosol, nucleus | 89.81 | 89.81 |
| Zm00001d038380_P001 | Maize | extracellular, plasma membrane | 89.35 | 89.77 |
| Os07t0239400-01 | Rice | plasma membrane | 89.35 | 89.77 |
| EES19652 | Sorghum | cytosol | 89.35 | 89.77 |
| Zm00001d010538_P005 | Maize | cytosol | 89.35 | 89.77 |
| Os03t0819900-01 | Rice | plasma membrane | 88.89 | 89.72 |
| GSMUA_Achr10P... | Banana | cytosol | 89.35 | 89.35 |
| GSMUA_Achr6P34270_001 | Banana | cytosol | 89.35 | 89.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 89.35 | 89.35 |
| GSMUA_Achr11P... | Banana | cytosol | 88.89 | 88.89 |
| GSMUA_Achr9P03220_001 | Banana | cytosol | 88.89 | 88.89 |
| EER93195 | Sorghum | cytosol | 87.96 | 88.78 |
| Zm00001d034638_P001 | Maize | cytosol | 87.96 | 88.37 |
| TraesCS1D01G285200.1 | Wheat | cytosol | 87.5 | 88.32 |
| TraesCS1A01G286200.1 | Wheat | cytosol | 87.5 | 88.32 |
| TraesCS1B01G295600.1 | Wheat | cytosol | 87.5 | 88.32 |
| TraesCS3A01G356000.3 | Wheat | plastid | 87.5 | 87.5 |
| GSMUA_Achr8P02620_001 | Banana | cytosol | 87.5 | 87.5 |
| GSMUA_Achr10P... | Banana | cytosol | 87.5 | 87.5 |
| TraesCS3B01G388900.1 | Wheat | cytosol | 87.04 | 87.04 |
| TraesCS5B01G489300.1 | Wheat | golgi | 85.65 | 86.45 |
| TraesCS5A01G476400.1 | Wheat | cytosol | 85.19 | 85.98 |
| TraesCS5D01G489700.1 | Wheat | cytosol | 84.72 | 85.51 |
| AT5G03520.1 | Thale cress | cytosol | 85.19 | 85.19 |
| OQU88745 | Sorghum | cytosol | 88.43 | 84.51 |
| AT3G09900.1 | Thale cress | cytosol | 85.19 | 84.4 |
| HORVU1Hr1G072070.1 | Barley | cytosol | 83.33 | 80.0 |
| TraesCS3D01G350000.3 | Wheat | cytosol | 87.04 | 78.99 |
| CDY07577 | Canola | cytosol | 96.3 | 77.9 |
| CDY52746 | Canola | cytosol | 95.83 | 76.95 |
| Bra003149.1-P | Field mustard | cytosol | 95.83 | 76.95 |
| HORVU5Hr1G112790.2 | Barley | cytosol, extracellular | 79.17 | 66.02 |
| HORVU3Hr1G086830.7 | Barley | cytosol | 75.0 | 61.13 |
| AT1G02130.1 | Thale cress | cytosol | 56.94 | 60.59 |
| AT5G47200.1 | Thale cress | cytosol | 55.56 | 59.41 |
| AT4G17530.1 | Thale cress | cytosol | 55.56 | 59.41 |
| AT3G11730.1 | Thale cress | cytosol | 53.7 | 56.59 |
| AT4G35860.1 | Thale cress | cytosol | 43.06 | 44.08 |
| AT4G17160.1 | Thale cress | cytosol | 41.2 | 43.41 |
| AT4G17170.1 | Thale cress | cytosol | 42.13 | 43.13 |
Protein Annotations
| MapMan:22.8.1.5 | Gene3D:3.40.50.300 | EntrezGene:823749 | EntrezGene:824529 | EntrezGene:836105 | UniProt:A0A178V8G1 |
| ProteinID:AEE79116.1 | ProteinID:AEE79117.1 | ProteinID:AEE79118.1 | EMBL:AK228083 | EMBL:AK230120 | ArrayExpress:AT3G53610 |
| EnsemblPlantsGene:AT3G53610 | RefSeq:AT3G53610 | TAIR:AT3G53610 | RefSeq:AT3G53610-TAIR-G | EnsemblPlants:AT3G53610.3 | TAIR:AT3G53610.3 |
| Symbol:ATRAB8 | EMBL:AY086756 | EMBL:BT004779 | ProteinID:CAB67668.1 | GO:GO:0000139 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009987 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0017157 | RefSeq:NP_001078278.1 | RefSeq:NP_190929.1 |
| RefSeq:NP_850696.1 | UniProt:O24466 | ProteinID:OAP02580.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF642 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EMBL:U82434 | UniParc:UPI000000C481 |
| SEG:seg | : | : | : | : | : |
Description
RABE1ARas-related protein RABE1a [Source:UniProtKB/Swiss-Prot;Acc:O24466]
Coordinates
chr3:-:19876232..19878792
Molecular Weight (calculated)
23940.4 Da
IEP (calculated)
8.443
GRAVY (calculated)
-0.346
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
201: GAGTSQATQK SACCGT
101: SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
201: GAGTSQATQK SACCGT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.