Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G17170.1 | Thale cress | cytosol | 83.9 | 81.52 |
| CDY58166 | Canola | cytosol | 81.95 | 80.0 |
| CDY50126 | Canola | cytosol | 81.95 | 80.0 |
| Bra021065.1-P | Field mustard | cytosol | 81.95 | 80.0 |
| Solyc10g007700.2.1 | Tomato | plastid | 81.95 | 79.62 |
| PGSC0003DMT400079822 | Potato | cytosol | 81.95 | 79.62 |
| Zm00001d025660_P001 | Maize | plasma membrane, plastid | 81.46 | 79.52 |
| Os02t0586400-01 | Rice | plasma membrane | 81.46 | 79.52 |
| TraesCS2D01G331300.1 | Wheat | golgi, plastid | 80.98 | 79.05 |
| TraesCS2B01G350600.1 | Wheat | cytosol | 80.98 | 79.05 |
| TraesCS2A01G331600.1 | Wheat | cytosol | 80.98 | 79.05 |
| TraesCS6A01G207100.1 | Wheat | cytosol | 80.98 | 79.05 |
| TraesCS6B01G230400.2 | Wheat | cytosol | 80.98 | 79.05 |
| EES10970 | Sorghum | cytoskeleton, cytosol, endoplasmic reticulum | 80.98 | 79.05 |
| HORVU6Hr1G051470.1 | Barley | cytosol | 80.98 | 79.05 |
| TraesCS6D01G188500.1 | Wheat | golgi | 80.98 | 79.05 |
| PGSC0003DMT400020113 | Potato | cytosol | 80.98 | 78.67 |
| Solyc12g011130.1.1 | Tomato | cytosol | 80.98 | 78.67 |
| EES05332 | Sorghum | cytosol | 80.49 | 78.57 |
| Os04t0470100-01 | Rice | plasma membrane | 79.02 | 76.78 |
| AT4G35860.1 | Thale cress | cytosol | 77.07 | 74.88 |
| Zm00001d017026_P003 | Maize | cytosol, endoplasmic reticulum, nucleus | 80.0 | 72.57 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, vacuole | 48.29 | 71.22 |
| Zm00001d050915_P004 | Maize | cytosol | 78.05 | 64.52 |
| AT4G17530.1 | Thale cress | cytosol | 47.8 | 48.51 |
| AT5G47200.1 | Thale cress | cytosol | 47.32 | 48.02 |
| AT3G11730.1 | Thale cress | cytosol | 46.83 | 46.83 |
| AT1G02130.1 | Thale cress | cytosol | 45.85 | 46.31 |
| AT5G59840.1 | Thale cress | cytosol | 44.39 | 42.13 |
| AT3G46060.1 | Thale cress | cytosol | 43.9 | 41.67 |
| AT3G53610.3 | Thale cress | cytosol | 43.41 | 41.2 |
| AT5G03520.1 | Thale cress | cytosol | 41.95 | 39.81 |
| AT3G09900.1 | Thale cress | cytosol | 41.46 | 38.99 |
Protein Annotations
| MapMan:22.8.1.2 | Gene3D:3.40.50.300 | EntrezGene:827427 | UniProt:A0A178UXW9 | ProteinID:AEE83856.1 | ArrayExpress:AT4G17160 |
| EnsemblPlantsGene:AT4G17160 | RefSeq:AT4G17160 | TAIR:AT4G17160 | RefSeq:AT4G17160-TAIR-G | EnsemblPlants:AT4G17160.1 | TAIR:AT4G17160.1 |
| Symbol:ATRAB2B | ProteinID:CAB10497.1 | ProteinID:CAB80987.1 | EMBL:DQ056652 | GO:GO:0000139 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_193449.1 | UniProt:O23561 |
| ProteinID:OAO97702.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF843 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A2B96 | : | : |
Description
RABB1ARABB1a [Source:UniProtKB/TrEMBL;Acc:A0A178UXW9]
Coordinates
chr4:-:9641859..9643738
Molecular Weight (calculated)
22946.1 Da
IEP (calculated)
6.673
GRAVY (calculated)
-0.452
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYAYRFKYI IIGDTGVGKS CLLLKFTDKR FQAVHDLTIG VEFGAKTITI DNKPIKLQIW DTAGQESFRS VTRSYYRGRA GTLLVYDITR RETFNHLASW
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
101: LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
201: RGCCG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.