Factsheet for AT5G59840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31592	Canola	cytosol	97.69	97.69
AT3G46060.1	Thale cress	cytosol	97.22	97.22
Bra006690.1-P	Field mustard	cytosol	97.22	97.22
Bra002527.1-P	Field mustard	cytosol	97.22	97.22
CDY72056	Canola	cytosol	56.02	96.8
CDX88726	Canola	cytosol	96.76	96.76
CDX88725	Canola	cytosol	96.76	96.76
KRH29838	Soybean	endoplasmic reticulum	94.91	95.79
AT3G53610.3	Thale cress	cytosol	95.37	95.37
KRH24835	Soybean	cytosol	94.44	95.33
CDX80224	Canola	cytosol	93.98	95.31
Solyc06g005350.2.1	Tomato	cytosol	63.43	95.14
VIT_06s0004g04200.t01	Wine grape	cytosol	94.91	94.91
PGSC0003DMT400040138	Potato	cytosol	93.52	93.52
Bra020282.1-P	Field mustard	cytosol	93.52	93.52
KRH10292	Soybean	cytosol	93.06	93.49
KRH23030	Soybean	endoplasmic reticulum	92.59	93.02
PGSC0003DMT400008917	Potato	cytosol	92.59	92.59
Solyc11g073050.1.1	Tomato	endoplasmic reticulum	92.59	92.59
CDY09249	Canola	cytosol	92.59	92.59
GSMUA_Achr10P...	Banana	cytosol	91.2	91.2
GSMUA_Achr11P...	Banana	cytosol	91.2	91.2
GSMUA_Achr6P34270_001	Banana	cytosol	91.2	91.2
GSMUA_Achr9P03220_001	Banana	cytosol	91.2	91.2
Os05t0461300-01	Rice	plastid	91.2	91.2
Os07t0239400-01	Rice	plasma membrane	90.74	91.16
Os03t0819900-01	Rice	plasma membrane	90.28	91.12
Zm00001d010538_P005	Maize	cytosol	90.28	90.7
Zm00001d034638_P001	Maize	cytosol	90.28	90.7
Zm00001d038380_P001	Maize	extracellular, plasma membrane	90.28	90.7
EES19652	Sorghum	cytosol	90.28	90.7
EER93195	Sorghum	cytosol	89.81	90.65
GSMUA_AchrUn_...	Banana	cytosol	90.28	90.28
TraesCS1D01G285200.1	Wheat	cytosol	88.43	89.25
TraesCS1B01G295600.1	Wheat	cytosol	88.43	89.25
TraesCS1A01G286200.1	Wheat	cytosol	88.43	89.25
GSMUA_Achr8P02620_001	Banana	cytosol	88.89	88.89
TraesCS3B01G388900.1	Wheat	cytosol	88.89	88.89
TraesCS3A01G356000.3	Wheat	plastid	88.89	88.89
GSMUA_Achr10P...	Banana	cytosol	88.89	88.89
TraesCS5B01G489300.1	Wheat	golgi	87.5	88.32
TraesCS5A01G476400.1	Wheat	cytosol	87.04	87.85
TraesCS5D01G489700.1	Wheat	cytosol	86.57	87.38
OQU88745	Sorghum	cytosol	89.35	85.4
AT5G03520.1	Thale cress	cytosol	85.19	85.19
AT3G09900.1	Thale cress	cytosol	84.26	83.49
HORVU1Hr1G072070.1	Barley	cytosol	85.65	82.22
CDY34032	Canola	cytosol	55.09	80.95
TraesCS3D01G350000.3	Wheat	cytosol	88.89	80.67
CDY70243	Canola	cytosol	54.63	77.63
CDX94925	Canola	cytosol	55.56	73.17
HORVU5Hr1G112790.2	Barley	cytosol, extracellular	81.02	67.57
HORVU3Hr1G086830.7	Barley	cytosol	76.39	62.26
AT1G02130.1	Thale cress	cytosol	58.33	62.07
AT4G17530.1	Thale cress	cytosol	57.87	61.88
AT5G47200.1	Thale cress	cytosol	57.87	61.88
AT3G11730.1	Thale cress	cytosol	54.63	57.56
AT4G35860.1	Thale cress	cytosol	43.52	44.55
AT4G17160.1	Thale cress	cytosol	42.13	44.39
AT4G17170.1	Thale cress	cytosol	42.59	43.6

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	EntrezGene:836105	UniProt:A0A178UCX7	ProteinID:AED97240.1	ArrayExpress:AT5G59840
EnsemblPlantsGene:AT5G59840	RefSeq:AT5G59840	TAIR:AT5G59840	RefSeq:AT5G59840-TAIR-G	EnsemblPlants:AT5G59840.1	TAIR:AT5G59840.1
ProteinID:BAB08351.1	EMBL:BT004152	EMBL:BT005628	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009306	GO:GO:0009506	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0017157	RefSeq:NP_200792.1	ProteinID:OAO91499.1	InterPro:P-loop_NTPase
PFAM:PF00071	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF826	UniProt:Q9FJF1	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000000C2AE	SEG:seg	:	:	:	:

Description

Putative GTP-binding protein ara-3 [Source:UniProtKB/TrEMBL;Acc:Q9FJF1]

Coordinates

chr5:-:24107215..24109524

Molecular Weight (calculated)

23835.3 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.298

Length

216 amino acids

Sequence
(BLAST)

001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.