Factsheet for Bra006690.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88725	Canola	cytosol	99.54	99.54
CDX88726	Canola	cytosol	99.54	99.54
AT5G59840.1	Thale cress	cytosol	97.22	97.22
Bra002527.1-P	Field mustard	cytosol	96.3	96.3
Bra019475.1-P	Field mustard	cytosol	94.91	94.91
Bra020282.1-P	Field mustard	cytosol	94.91	94.91
Solyc06g005350.2.1	Tomato	cytosol	62.96	94.44
KRH29838	Soybean	endoplasmic reticulum	93.52	94.39
Bra033830.1-P	Field mustard	cytosol	84.26	94.3
VIT_06s0004g04200.t01	Wine grape	cytosol	93.98	93.98
KRH24835	Soybean	cytosol	93.06	93.93
KRH10292	Soybean	cytosol	91.67	92.09
PGSC0003DMT400040138	Potato	cytosol	91.67	91.67
KRH23030	Soybean	endoplasmic reticulum	91.2	91.63
PGSC0003DMT400008917	Potato	cytosol	91.2	91.2
Solyc11g073050.1.1	Tomato	endoplasmic reticulum	90.74	90.74
Os03t0819900-01	Rice	plasma membrane	88.89	89.72
GSMUA_Achr9P03220_001	Banana	cytosol	89.35	89.35
GSMUA_Achr11P...	Banana	cytosol	89.35	89.35
GSMUA_Achr6P34270_001	Banana	cytosol	89.35	89.35
GSMUA_Achr10P...	Banana	cytosol	89.35	89.35
Os05t0461300-01	Rice	plastid	89.35	89.35
Os07t0239400-01	Rice	plasma membrane	88.89	89.3
Zm00001d034638_P001	Maize	cytosol	88.89	89.3
EER93195	Sorghum	cytosol	88.43	89.25
Zm00001d010538_P005	Maize	cytosol	88.43	88.84
Zm00001d038380_P001	Maize	extracellular, plasma membrane	88.43	88.84
EES19652	Sorghum	cytosol	88.43	88.84
GSMUA_AchrUn_...	Banana	cytosol	88.43	88.43
TraesCS1D01G285200.1	Wheat	cytosol	87.04	87.85
TraesCS1B01G295600.1	Wheat	cytosol	87.04	87.85
TraesCS1A01G286200.1	Wheat	cytosol	87.04	87.85
GSMUA_Achr8P02620_001	Banana	cytosol	87.04	87.04
TraesCS3B01G388900.1	Wheat	cytosol	87.04	87.04
TraesCS3A01G356000.3	Wheat	plastid	87.04	87.04
GSMUA_Achr10P...	Banana	cytosol	87.04	87.04
TraesCS5B01G489300.1	Wheat	golgi	86.11	86.92
TraesCS5A01G476400.1	Wheat	cytosol	85.65	86.45
TraesCS5D01G489700.1	Wheat	cytosol	85.19	85.98
OQU88745	Sorghum	cytosol	87.96	84.07
Bra005767.1-P	Field mustard	cytosol	84.26	83.87
HORVU1Hr1G072070.1	Barley	cytosol	85.19	81.78
Bra029803.1-P	Field mustard	cytosol	82.87	79.2
TraesCS3D01G350000.3	Wheat	cytosol	87.04	78.99
Bra003149.1-P	Field mustard	cytosol	94.91	76.21
HORVU5Hr1G112790.2	Barley	cytosol, extracellular	80.09	66.8
HORVU3Hr1G086830.7	Barley	cytosol	75.0	61.13
Bra024956.1-P	Field mustard	cytosol	56.48	60.4
Bra012658.1-P	Field mustard	cytosol	56.48	60.4
Bra022113.1-P	Field mustard	cytosol	56.02	59.9
Bra017497.1-P	Field mustard	cytosol	56.02	59.9
Bra001418.1-P	Field mustard	cytosol, extracellular	55.09	57.77
Bra038676.1-P	Field mustard	vacuole	55.09	57.77
Bra038265.1-P	Field mustard	cytosol	96.3	55.32
Bra040162.1-P	Field mustard	cytosol	55.56	43.8
Bra021065.1-P	Field mustard	cytosol	41.67	42.86
Bra026231.1-P	Field mustard	cytosol	41.67	42.65
Bra011645.1-P	Field mustard	cytosol	41.67	42.65
Bra017733.1-P	Field mustard	cytosol	41.2	42.18

Protein Annotations

MapMan:22.8.1.5	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra006690	EnsemblPlants:Bra006690.1	EnsemblPlants:Bra006690.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4CR49	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF826	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8E4	SEG:seg

Description

AT3G46060 (E=8e-097) ARA3 | ATRAB8A; GTP binding

Coordinates

chrA03:+:4649424..4650793

Molecular Weight (calculated)

23910.3 Da

IEP (calculated)

8.022

GRAVY (calculated)

-0.309

Length

216 amino acids

Sequence
(BLAST)

001: MAAPPARGRA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD TKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP TSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LTDTDSRAEP ATIRISQTDQ
201: AAGAGQATQK SACCGT

Best Arabidopsis Sequence Match ( AT5G59840.1 )
(BLAST)

001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGS

Arabidopsis Description

Putative GTP-binding protein ara-3 [Source:UniProtKB/TrEMBL;Acc:Q9FJF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.