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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002527.1-P Field mustard cytosol 99.54 99.54
AT5G59840.1 Thale cress cytosol 97.69 97.69
CDX80224 Canola cytosol 95.83 97.18
CDY72056 Canola cytosol 56.02 96.8
CDY71506 Canola cytosol 96.76 96.76
CDX68365 Canola cytosol 96.76 96.76
CDY30926 Canola cytosol 96.3 96.3
CDX88725 Canola cytosol 96.3 96.3
CDX88726 Canola cytosol 96.3 96.3
CDX86045 Canola cytosol 95.83 95.83
CDX77855 Canola cytosol 95.37 95.37
KRH29838 Soybean endoplasmic reticulum 94.44 95.33
KRH24835 Soybean cytosol 93.98 94.86
Solyc06g005350.2.1 Tomato cytosol 62.96 94.44
VIT_06s0004g04200.t01 Wine grape cytosol 93.52 93.52
PGSC0003DMT400040138 Potato cytosol 93.52 93.52
Solyc11g073050.1.1 Tomato endoplasmic reticulum 92.59 92.59
CDY09249 Canola cytosol 92.13 92.13
PGSC0003DMT400008917 Potato cytosol 92.13 92.13
KRH10292 Soybean cytosol 91.67 92.09
KRH23030 Soybean endoplasmic reticulum 91.2 91.63
Os05t0461300-01 Rice plastid 90.74 90.74
GSMUA_Achr9P03220_001 Banana cytosol 90.74 90.74
GSMUA_Achr6P34270_001 Banana cytosol 90.74 90.74
GSMUA_Achr11P... Banana cytosol 90.74 90.74
GSMUA_Achr10P... Banana cytosol 90.74 90.74
EES19652 Sorghum cytosol 89.81 90.23
Zm00001d010538_P005 Maize cytosol 89.81 90.23
Zm00001d038380_P001 Maize extracellular, plasma membrane 89.81 90.23
Os03t0819900-01 Rice plasma membrane 89.35 90.19
Zm00001d034638_P001 Maize cytosol 89.35 89.77
Os07t0239400-01 Rice plasma membrane 89.35 89.77
EER93195 Sorghum cytosol 88.89 89.72
GSMUA_AchrUn_... Banana cytosol 88.89 88.89
TraesCS1A01G286200.1 Wheat cytosol 87.96 88.78
TraesCS1B01G295600.1 Wheat cytosol 87.96 88.78
TraesCS1D01G285200.1 Wheat cytosol 87.96 88.78
TraesCS3A01G356000.3 Wheat plastid 88.43 88.43
GSMUA_Achr8P02620_001 Banana cytosol 88.43 88.43
TraesCS3B01G388900.1 Wheat cytosol 88.43 88.43
GSMUA_Achr10P... Banana cytosol 87.5 87.5
TraesCS5B01G489300.1 Wheat golgi 86.57 87.38
TraesCS5A01G476400.1 Wheat cytosol 86.11 86.92
TraesCS5D01G489700.1 Wheat cytosol 85.65 86.45
CDY11256 Canola cytosol 85.65 85.25
OQU88745 Sorghum cytosol 87.96 84.07
CDY41572 Canola cytosol 83.8 83.03
CDY54609 Canola cytosol 83.8 83.03
CDX80871 Canola cytosol 85.65 82.96
HORVU1Hr1G072070.1 Barley cytosol 86.11 82.67
CDY34032 Canola cytosol 55.09 80.95
TraesCS3D01G350000.3 Wheat cytosol 88.43 80.25
CDY70243 Canola cytosol 54.63 77.63
CDY07577 Canola cytosol 94.44 76.4
CDY52746 Canola cytosol 93.98 75.46
CDX94925 Canola cytosol 55.09 72.56
CDX99131 Canola cytosol 95.37 66.88
HORVU5Hr1G112790.2 Barley cytosol, extracellular 80.09 66.8
HORVU3Hr1G086830.7 Barley cytosol 76.39 62.26
CDX76566 Canola cytosol 57.87 61.88
CDY65880 Canola cytosol 57.87 61.88
CDY33521 Canola cytosol 56.94 60.89
CDX77748 Canola cytosol 56.94 60.89
CDX90468 Canola cytosol 56.48 60.4
CDY28967 Canola cytosol 56.48 60.4
CDY43436 Canola cytosol 56.48 60.4
CDY40564 Canola cytosol 56.48 60.4
CDY67887 Canola cytosol 56.48 60.1
CDY56593 Canola cytosol 55.09 57.77
CDX73855 Canola cytosol 55.09 57.77
CDY47919 Canola vacuole 55.09 57.77
CDY52557 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 56.48 57.28
CDY38404 Canola endoplasmic reticulum 56.94 56.16
CDY38055 Canola cytosol 57.87 52.74
CDX85225 Canola cytosol 38.43 52.53
CDY09621 Canola cytosol 54.63 48.56
CDX75535 Canola cytosol 43.06 44.08
CDX69177 Canola cytosol 43.06 44.08
CDY47039 Canola plasma membrane 42.59 43.6
CDX72559 Canola cytosol 42.59 43.6
CDY58166 Canola cytosol 42.13 43.33
CDY50126 Canola cytosol 42.13 43.33
CDY09641 Canola cytosol 42.13 43.13
CDY35596 Canola cytosol 42.13 43.13
CDY42961 Canola cytosol 42.13 43.13
Protein Annotations
MapMan:22.8.1.5Gene3D:3.40.50.300GO:A0A078H276UniProt:A0A078H276EnsemblPlants:CDY31592ProteinID:CDY31592
ProteinID:CDY31592.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00047919001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF826SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231
UniParc:UPI0004EDBA83SEG:seg::::
Description
BnaA10g12790DBnaA10g12790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H276]
Coordinates
chrLK032274:+:464842..466807
Molecular Weight (calculated)
23849.3 Da
IEP (calculated)
8.443
GRAVY (calculated)
-0.307
Length
216 amino acids
Sequence
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KAKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LTDTDSRAEP STIKIGQTDQ
201: AAGAGQATQK SACCGT
Best Arabidopsis Sequence Match ( AT5G59840.1 )
(BLAST)
001: MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
101: SSFNNIRNWI RNIEQHASDN VNKILVGNKA DMDESKRAVP KSKGQALADE YGIKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDSRAEP ATIKISQTDQ
201: AAGAGQATQK SACCGS
Arabidopsis Description
Putative GTP-binding protein ara-3 [Source:UniProtKB/TrEMBL;Acc:Q9FJF1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.