Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65880 | Canola | cytosol | 100.0 | 100.0 |
| AT4G17530.1 | Thale cress | cytosol | 99.01 | 99.01 |
| CDX90468 | Canola | cytosol | 98.02 | 98.02 |
| CDY28967 | Canola | cytosol | 97.52 | 97.52 |
| CDY33521 | Canola | cytosol | 97.52 | 97.52 |
| CDX77748 | Canola | cytosol | 97.52 | 97.52 |
| CDY43436 | Canola | cytosol | 97.52 | 97.52 |
| CDY40564 | Canola | cytosol | 97.52 | 97.52 |
| CDY67887 | Canola | cytosol | 97.52 | 97.04 |
| CDY52557 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 97.52 | 92.49 |
| CDX85225 | Canola | cytosol | 70.79 | 90.51 |
| CDY38404 | Canola | endoplasmic reticulum | 97.52 | 89.95 |
| CDY09621 | Canola | cytosol | 95.05 | 79.01 |
| CDY47919 | Canola | vacuole | 75.74 | 74.27 |
| CDY56593 | Canola | cytosol | 75.25 | 73.79 |
| CDX73855 | Canola | cytosol | 75.25 | 73.79 |
| CDY38055 | Canola | cytosol | 84.16 | 71.73 |
| CDY72056 | Canola | cytosol | 41.09 | 66.4 |
| CDY71506 | Canola | cytosol | 62.38 | 58.33 |
| CDY30926 | Canola | cytosol | 62.38 | 58.33 |
| CDX68365 | Canola | cytosol | 62.38 | 58.33 |
| CDX86045 | Canola | cytosol | 61.88 | 57.87 |
| CDX77855 | Canola | cytosol | 61.88 | 57.87 |
| CDY31592 | Canola | cytosol | 61.88 | 57.87 |
| CDX88726 | Canola | cytosol | 60.4 | 56.48 |
| CDX88725 | Canola | cytosol | 60.4 | 56.48 |
| CDX80224 | Canola | cytosol | 58.91 | 55.87 |
| CDY11256 | Canola | cytosol | 59.9 | 55.76 |
| CDY54609 | Canola | cytosol | 58.91 | 54.59 |
| CDY41572 | Canola | cytosol | 58.91 | 54.59 |
| CDX80871 | Canola | cytosol | 59.9 | 54.26 |
| CDY09249 | Canola | cytosol | 57.92 | 54.17 |
| CDY34032 | Canola | cytosol | 35.64 | 48.98 |
| CDY70243 | Canola | cytosol | 35.64 | 47.37 |
| CDY07577 | Canola | cytosol | 60.89 | 46.07 |
| CDX72559 | Canola | cytosol | 48.02 | 45.97 |
| CDY52746 | Canola | cytosol | 60.89 | 45.72 |
| CDX75535 | Canola | cytosol | 47.52 | 45.5 |
| CDX69177 | Canola | cytosol | 47.52 | 45.5 |
| CDX94925 | Canola | cytosol | 36.63 | 45.12 |
| CDY47039 | Canola | plasma membrane | 47.03 | 45.02 |
| CDY50126 | Canola | cytosol | 46.53 | 44.76 |
| CDY58166 | Canola | cytosol | 46.53 | 44.76 |
| CDY42961 | Canola | cytosol | 46.04 | 44.08 |
| CDY09641 | Canola | cytosol | 46.04 | 44.08 |
| CDY35596 | Canola | cytosol | 46.04 | 44.08 |
| CDX99131 | Canola | cytosol | 61.88 | 40.58 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:A0A078JHB1 | UniProt:A0A078JHB1 | EnsemblPlants:CDX76566 | ProteinID:CDX76566 |
| ProteinID:CDX76566.1 | ProteinID:CDY65880.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00127006001 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI00006C6081 | : | : | : | : | : |
Description
BnaA08g08340DBnaA08g08340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHB1]
Coordinates
chrLK031807:+:2140975..2142587
Molecular Weight (calculated)
22324.4 Da
IEP (calculated)
5.042
GRAVY (calculated)
-0.305
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDQESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPSTVQIRG QPVNQQSGCC
201: SS
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPSTVQIRG QPVNQQSGCC
201: SS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS
Arabidopsis Description
RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.