Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G230700.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU3Hr1G048090.1 | Barley | plasma membrane | 90.05 | 98.03 |
| TraesCS3A01G203100.1 | Wheat | plastid | 90.05 | 98.03 |
| Os01t0558600-01 | Rice | plasma membrane | 87.33 | 95.54 |
| EES03124 | Sorghum | cytosol | 85.97 | 93.6 |
| Zm00001d011162_P002 | Maize | plasma membrane | 85.52 | 93.1 |
| TraesCS3D01G056500.1 | Wheat | golgi | 78.73 | 85.71 |
| TraesCS3D01G056600.1 | Wheat | plastid | 77.83 | 84.73 |
| TraesCS1D01G013200.1 | Wheat | cytosol, extracellular | 67.87 | 73.53 |
| TraesCS2D01G309200.2 | Wheat | cytosol | 65.16 | 67.61 |
| TraesCS1D01G285200.1 | Wheat | cytosol | 53.39 | 55.14 |
| TraesCS5D01G489700.1 | Wheat | cytosol | 53.39 | 55.14 |
| TraesCS3D01G350000.3 | Wheat | cytosol | 53.85 | 50.0 |
| TraesCS6D01G188500.1 | Wheat | golgi | 43.44 | 45.71 |
| TraesCS2D01G331300.1 | Wheat | golgi, plastid | 42.08 | 44.29 |
| TraesCS5D01G264100.1 | Wheat | cytosol | 38.01 | 39.62 |
| TraesCS3D01G495900.1 | Wheat | cytosol | 31.67 | 39.11 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF845 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| EnsemblPlantsGene:TraesCS3D01G206600 | EnsemblPlants:TraesCS3D01G206600.1 | TIGR:cd01869 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:269611112..269614041
Molecular Weight (calculated)
24358.9 Da
IEP (calculated)
5.395
GRAVY (calculated)
-0.309
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEIADSRMR SSSSRPTGFV PPTDYLFKLL LIGDSGVGKS CLLLRFADDS YLESYISTIG VDFKIRTVEQ DGKTIKLQIW DTAGQERFRT ITSSYYRGAH
101: GIIVVYDVTD QESFNNVKQW LNEIDRYASE NVNKLLVGNK CDLAESRVVS YEAGKALADE IGIPFLETSA KDATNVEKAF MTMAAEIKNR MASQPAGNAS
201: KPATVQMRGQ PVAQQNGCCS S
101: GIIVVYDVTD QESFNNVKQW LNEIDRYASE NVNKLLVGNK CDLAESRVVS YEAGKALADE IGIPFLETSA KDATNVEKAF MTMAAEIKNR MASQPAGNAS
201: KPATVQMRGQ PVAQQNGCCS S
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.