Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- endoplasmic reticulum 3
- golgi 3
- extracellular 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011162_P002 | Maize | plasma membrane | 99.51 | 99.51 |
| Os01t0558600-01 | Rice | plasma membrane | 97.54 | 98.02 |
| HORVU3Hr1G048090.1 | Barley | plasma membrane | 95.57 | 95.57 |
| TraesCS3A01G203100.1 | Wheat | plastid | 95.57 | 95.57 |
| TraesCS3B01G230700.1 | Wheat | cytosol | 93.6 | 85.97 |
| TraesCS3D01G206600.1 | Wheat | cytosol | 93.6 | 85.97 |
| EES07529 | Sorghum | cytosol | 85.71 | 85.71 |
| EES18842 | Sorghum | cytosol | 73.89 | 73.17 |
| EES10859 | Sorghum | cytosol | 73.89 | 72.46 |
| EER93195 | Sorghum | cytosol | 59.61 | 56.54 |
| EES19652 | Sorghum | cytosol | 59.11 | 55.81 |
| EER98157 | Sorghum | cytosol | 59.11 | 55.56 |
| OQU88745 | Sorghum | cytosol | 60.59 | 54.42 |
| EES10970 | Sorghum | cytoskeleton, cytosol, endoplasmic reticulum | 49.75 | 48.1 |
| EES05332 | Sorghum | cytosol | 48.77 | 47.14 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | EntrezGene:8078596 | UniProt:C5XNL6 | EnsemblPlants:EES03124 | ProteinID:EES03124 |
| ProteinID:EES03124.1 | GO:GO:0000139 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006888 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF845 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | EnsemblPlantsGene:SORBI_3003G189000 | SUPFAM:SSF52540 | unigene:Sbi.8326 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0001A84D54 | RefSeq:XP_002458004.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:50883142..50885917
Molecular Weight (calculated)
22521.6 Da
IEP (calculated)
4.897
GRAVY (calculated)
-0.301
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLAENRV VSYEAGKALA DEIGIPFLET SAKDATNVEK AFMTMAGEIK NRMASQPAAS GASRPATVQM RGQPVSQQSS
201: CCS
101: QWLNEIDRYA SENVNKLLVG NKCDLAENRV VSYEAGKALA DEIGIPFLET SAKDATNVEK AFMTMAGEIK NRMASQPAAS GASRPATVQM RGQPVSQQSS
201: CCS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS
Arabidopsis Description
RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.