CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
endoplasmic reticulum 3
golgi 3
extracellular 3
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57496	Soybean	endoplasmic reticulum	99.5	99.5
VIT_00s1372g00020.t01	Wine grape	cytosol	94.55	96.46
Solyc08g078070.2.1	Tomato	nucleus	94.55	94.09
Os02t0653800-01	Rice	plasma membrane	94.55	94.09
Os01t0179700-01	Rice	plasma membrane	94.55	94.09
PGSC0003DMT400067463	Potato	cytosol	94.06	93.6
GSMUA_Achr2P18340_001	Banana	plasma membrane	93.56	93.56
EES07529	Sorghum	cytosol	93.07	92.61
GSMUA_Achr11P...	Banana	cytosol	92.57	92.12
GSMUA_Achr8P15030_001	Banana	cytosol	92.08	91.63
KRH01059	Soybean	endoplasmic reticulum	91.58	91.58
TraesCS3D01G056500.1	Wheat	golgi	91.58	91.13
Bra022113.1-P	Field mustard	cytosol	90.59	90.59
Bra017497.1-P	Field mustard	cytosol	90.59	90.59
Bra024956.1-P	Field mustard	cytosol	90.1	90.1
KRH40178	Soybean	endoplasmic reticulum	90.1	90.1
TraesCS3D01G056600.1	Wheat	plastid	90.1	89.66
TraesCS3B01G070300.2	Wheat	cytosol	90.1	89.66
TraesCS3A01G056600.1	Wheat	cytosol	90.1	89.66
TraesCS3A01G056500.1	Wheat	cytosol	90.1	89.66
Bra012658.1-P	Field mustard	cytosol	89.6	89.6
KRH66494	Soybean	endoplasmic reticulum	89.6	89.16
AT1G02130.1	Thale cress	cytosol	89.6	89.16
HORVU3Hr1G010800.8	Barley	cytosol	70.3	87.12
TraesCS3A01G056800.1	Wheat	cytosol	76.73	82.01
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	90.59	80.62
KRH48822	Soybean	cytosol, endoplasmic reticulum	60.89	77.85
KRH26285	Soybean	endoplasmic reticulum	77.23	77.61
KRH06045	Soybean	cytosol	77.23	77.61
CDY38055	Canola	cytosol	90.1	76.79
TraesCS3A01G056900.1	Wheat	mitochondrion	57.43	69.46
GSMUA_Achr7P06570_001	Banana	cytosol	93.07	68.36
Zm00001d051336_P001	Maize	plastid	90.59	67.28
HORVU3Hr1G010780.1	Barley	plasma membrane	91.58	66.31
Bra040162.1-P	Field mustard	cytosol	88.12	64.96
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	93.07	62.46
TraesCS3A01G056700.1	Wheat	cytosol	78.22	61.96
KRH23030	Soybean	endoplasmic reticulum	62.38	58.6
KRH10292	Soybean	cytosol	62.38	58.6
KRH29838	Soybean	endoplasmic reticulum	61.88	58.41
KRH24835	Soybean	cytosol	61.39	57.94
KRH36193	Soybean	endoplasmic reticulum, extracellular	61.88	57.87
KRG90563	Soybean	cytosol	61.39	57.41
KRH01606	Soybean	endoplasmic reticulum	61.39	57.41
KRH70501	Soybean	endoplasmic reticulum	61.39	57.41
KRH11646	Soybean	endoplasmic reticulum	48.02	45.97
KRH36659	Soybean	cytosol	48.02	45.97
Zm00001d017456_P003	Maize	cytosol	91.09	45.89
KRG93957	Soybean	endoplasmic reticulum	46.53	44.55
KRH58242	Soybean	endoplasmic reticulum	46.53	44.55

Protein Annotations

EntrezGene:100818694	MapMan:22.8.1.4	Gene3D:3.40.50.300	UniProt:A0A0R4J5M7	EMBL:ACUP02010389	EnsemblPlantsGene:GLYMA_17G146100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlants:KRH04201	ProteinID:KRH04201	ProteinID:KRH04201.1	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI00019AA900	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:12040625..12044127

Molecular Weight (calculated)

22498.7 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.304

Length

202 amino acids

Sequence
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTANKV VSSETAKAFA DEIGIPFMET SAKNATNVEQ AFMAMAAEIK NRMASQPVNN ARPPTVQIRG QPVNQKAGCC
201: ST

Best Arabidopsis Sequence Match ( AT4G17530.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG SKPPTVQIRG QPVNQQSGCC
201: SS

Arabidopsis Description

RABD2CRAB1C [Source:UniProtKB/TrEMBL;Acc:A0A178USY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.