Factsheet for TraesCS3A01G056700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G056500.1	Wheat	cytosol	66.27	83.25
TraesCS3D01G056500.1	Wheat	golgi	65.88	82.76
TraesCS3A01G056600.1	Wheat	cytosol	63.53	79.8
VIT_16s0013g00520.t01	Wine grape	extracellular	63.14	79.31
VIT_00s1372g00020.t01	Wine grape	cytosol	61.18	78.79
KRH57496	Soybean	endoplasmic reticulum	62.35	78.71
KRH04201	Soybean	cytosol, extracellular	61.96	78.22
Os01t0179700-01	Rice	plasma membrane	61.96	77.83
Os02t0653800-01	Rice	plasma membrane	61.96	77.83
GSMUA_Achr2P18340_001	Banana	plasma membrane	61.57	77.72
KRH01059	Soybean	endoplasmic reticulum	61.57	77.72
Solyc05g052070.2.1	Tomato	unclear	61.57	77.34
PGSC0003DMT400041326	Potato	cytosol	61.57	77.34
EES07529	Sorghum	cytosol	61.57	77.34
KRH40178	Soybean	endoplasmic reticulum	60.39	76.24
Solyc08g078070.2.1	Tomato	nucleus	60.39	75.86
GSMUA_Achr11P...	Banana	cytosol	60.0	75.37
PGSC0003DMT400067463	Potato	cytosol	60.0	75.37
GSMUA_Achr8P15030_001	Banana	cytosol	59.61	74.88
TraesCS3A01G203100.1	Wheat	plastid	59.61	74.88
Bra012658.1-P	Field mustard	cytosol	59.22	74.75
Bra024956.1-P	Field mustard	cytosol	59.22	74.75
Bra022113.1-P	Field mustard	cytosol	59.22	74.75
Bra017497.1-P	Field mustard	cytosol	59.22	74.75
AT1G02130.1	Thale cress	cytosol	59.22	74.38
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.43	73.4
KRH66494	Soybean	endoplasmic reticulum	58.43	73.4
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	58.43	73.4
TraesCS3A01G056800.1	Wheat	cytosol	54.12	73.02
Solyc01g090170.2.1	Tomato	unclear	56.86	71.43
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	61.18	68.72
TraesCS3A01G056900.1	Wheat	mitochondrion	43.14	65.87
CDY38055	Canola	cytosol	61.18	65.82
TraesCS1A01G015300.1	Wheat	cytosol, extracellular	52.55	65.37
KRH48822	Soybean	cytosol, endoplasmic reticulum	40.39	65.19
TraesCS2A01G311000.3	Wheat	cytosol	52.16	62.44
HORVU3Hr1G010780.1	Barley	plasma membrane	66.67	60.93
Zm00001d051336_P001	Maize	plastid	64.71	60.66
Bra040162.1-P	Field mustard	cytosol	60.39	56.2
GSMUA_Achr7P06570_001	Banana	cytosol	60.39	56.0
VIT_15s0021g01410.t01	Wine grape	cytosol	43.92	54.63
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	61.96	52.49
TraesCS1A01G286200.1	Wheat	cytosol	43.14	51.4
TraesCS3A01G356000.3	Wheat	plastid	43.53	51.39
TraesCS5A01G476400.1	Wheat	cytosol	42.75	50.93
TraesCS6A01G207100.1	Wheat	cytosol	34.9	42.38
TraesCS2A01G331600.1	Wheat	cytosol	34.51	41.9
TraesCS5A01G256000.1	Wheat	cytosol	32.55	40.49
Zm00001d017456_P003	Maize	cytosol	62.75	39.9
TraesCS3A01G489900.1	Wheat	cytosol	26.27	37.43

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS3A01G056700	EnsemblPlants:TraesCS3A01G056700.1	TIGR:cd01869	:	:	:

Description

No Description!

Coordinates

chr3A:+:32700757..32706314

Molecular Weight (calculated)

29100.4 Da

IEP (calculated)

8.098

GRAVY (calculated)

-0.066

Length

255 amino acids

Sequence
(BLAST)

001: MIPHLQTGSD GYLGSAVAPM DQVEIAKFCK QLRSLKHVDI IVRPVKLKKE YQIHKCCDVM QRWRAFCDYL FKLLLIGDSG VGKSCLLLRF ADDSYLDSYI
101: STIGVDFKIR TVEQDGKTIK LQIWDIARQE RFRTITSSYY RGAHGIIIVY DVTDQDSFNN VKQWLNEIDR YASENVNKLL VGNKCDLADK RAVSYETAKA
201: FADEIGIPFM ETSAKNALNV EQAFMAMAAS IKDRFGPTLK LAFMMVYINV LVYEL

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.