Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G010800.8 | Barley | cytosol | 82.54 | 95.71 |
| TraesCS3D01G056600.1 | Wheat | plastid | 93.12 | 86.7 |
| TraesCS3B01G070300.2 | Wheat | cytosol | 93.12 | 86.7 |
| TraesCS3A01G056600.1 | Wheat | cytosol | 93.12 | 86.7 |
| TraesCS3A01G056500.1 | Wheat | cytosol | 88.36 | 82.27 |
| VIT_00s1372g00020.t01 | Wine grape | cytosol | 84.13 | 80.3 |
| Os02t0653800-01 | Rice | plasma membrane | 85.19 | 79.31 |
| EES07529 | Sorghum | cytosol | 85.19 | 79.31 |
| Os01t0179700-01 | Rice | plasma membrane | 85.19 | 79.31 |
| KRH48822 | Soybean | cytosol, endoplasmic reticulum | 66.14 | 79.11 |
| GSMUA_Achr2P18340_001 | Banana | plasma membrane | 84.13 | 78.71 |
| GSMUA_Achr8P15030_001 | Banana | cytosol | 83.07 | 77.34 |
| KRH57496 | Soybean | endoplasmic reticulum | 82.54 | 77.23 |
| KRH01059 | Soybean | endoplasmic reticulum | 82.54 | 77.23 |
| VIT_16s0013g00520.t01 | Wine grape | extracellular | 82.54 | 76.85 |
| KRH04201 | Soybean | cytosol, extracellular | 82.01 | 76.73 |
| KRH40178 | Soybean | endoplasmic reticulum | 82.01 | 76.73 |
| KRH66494 | Soybean | endoplasmic reticulum | 82.01 | 76.35 |
| Solyc08g078070.2.1 | Tomato | nucleus | 82.01 | 76.35 |
| AT1G02130.1 | Thale cress | cytosol | 82.01 | 76.35 |
| GSMUA_Achr11P... | Banana | cytosol | 81.48 | 75.86 |
| PGSC0003DMT400067463 | Potato | cytosol | 81.48 | 75.86 |
| Solyc05g052070.2.1 | Tomato | unclear | 80.95 | 75.37 |
| PGSC0003DMT400034028 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 79.89 | 74.38 |
| PGSC0003DMT400041326 | Potato | cytosol | 79.89 | 74.38 |
| Solyc05g053940.2.1 | Tomato | nucleus, plastid, unclear | 79.89 | 74.38 |
| TraesCS3A01G056900.1 | Wheat | mitochondrion | 65.61 | 74.25 |
| TraesCS3A01G203100.1 | Wheat | plastid | 78.84 | 73.4 |
| Bra012658.1-P | Field mustard | cytosol | 78.31 | 73.27 |
| Bra017497.1-P | Field mustard | cytosol | 78.31 | 73.27 |
| Bra022113.1-P | Field mustard | cytosol | 78.31 | 73.27 |
| Bra024956.1-P | Field mustard | cytosol | 78.31 | 73.27 |
| GSMUA_Achr1P04400_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 85.19 | 70.93 |
| Solyc01g090170.2.1 | Tomato | unclear | 75.66 | 70.44 |
| CDY38055 | Canola | cytosol | 81.48 | 64.98 |
| TraesCS1A01G015300.1 | Wheat | cytosol, extracellular | 66.67 | 61.46 |
| Zm00001d051336_P001 | Maize | plastid | 85.19 | 59.19 |
| TraesCS2A01G311000.3 | Wheat | cytosol | 65.08 | 57.75 |
| GSMUA_Achr7P06570_001 | Banana | cytosol | 80.95 | 55.64 |
| Bra040162.1-P | Field mustard | cytosol | 78.84 | 54.38 |
| TraesCS3A01G056700.1 | Wheat | cytosol | 73.02 | 54.12 |
| VIT_15s0021g01410.t01 | Wine grape | cytosol | 57.67 | 53.17 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plastid | 82.54 | 51.83 |
| TraesCS3A01G356000.3 | Wheat | plastid | 52.38 | 45.83 |
| TraesCS5A01G476400.1 | Wheat | cytosol | 50.79 | 44.86 |
| TraesCS1A01G286200.1 | Wheat | cytosol | 50.79 | 44.86 |
| Zm00001d017456_P003 | Maize | cytosol | 85.19 | 40.15 |
| TraesCS6A01G207100.1 | Wheat | cytosol | 40.74 | 36.67 |
| TraesCS2A01G331600.1 | Wheat | cytosol | 40.21 | 36.19 |
| TraesCS5A01G256000.1 | Wheat | cytosol | 38.1 | 35.12 |
| TraesCS3A01G489900.1 | Wheat | cytosol | 28.04 | 29.61 |
Protein Annotations
| MapMan:22.8.1.4 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF666 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS3A01G056800 |
| EnsemblPlants:TraesCS3A01G056800.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:32716216..32718252
Molecular Weight (calculated)
21067.8 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.349
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTISLSFC LSETQDDSYL ESYISTIGVD FKIRTVEQDG KTMKLQIWDT AGQERFRTIT SSYYRGAHGI IIVYDVTDQD SFNNVKQWLN EIDRYASENV
101: NKLLVGNKSD LTDKRVVSYE TAKAFADEIG IPFMETSAKN ALNVEQAFMA MSASIKDRMA SQPAANSARP ATVQIRGQPV EQKTSCCSS
101: NKLLVGNKSD LTDKRVVSYE TAKAFADEIG IPFMETSAKN ALNVEQAFMA MSASIKDRMA SQPAANSARP ATVQIRGQPV EQKTSCCSS
001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST
Arabidopsis Description
RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.