Factsheet for Zm00001d017456_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07529	Sorghum	cytosol	49.63	98.03
Os02t0653800-01	Rice	plasma membrane	48.88	96.55
Os01t0179700-01	Rice	plasma membrane	48.63	96.06
VIT_00s1372g00020.t01	Wine grape	cytosol	45.64	92.42
TraesCS3D01G056500.1	Wheat	golgi	46.13	91.13
GSMUA_Achr2P18340_001	Banana	plasma membrane	45.89	91.09
KRH57496	Soybean	endoplasmic reticulum	45.89	91.09
KRH04201	Soybean	cytosol, extracellular	45.89	91.09
VIT_16s0013g00520.t01	Wine grape	extracellular	45.89	90.64
TraesCS3D01G056600.1	Wheat	plastid	45.89	90.64
TraesCS3B01G070300.2	Wheat	cytosol	45.89	90.64
Solyc08g078070.2.1	Tomato	nucleus	45.89	90.64
TraesCS3A01G056600.1	Wheat	cytosol	45.89	90.64
PGSC0003DMT400067463	Potato	cytosol	45.64	90.15
TraesCS3A01G056500.1	Wheat	cytosol	45.39	89.66
KRH01059	Soybean	endoplasmic reticulum	45.14	89.6
HORVU3Hr1G010800.8	Barley	cytosol	36.41	89.57
GSMUA_Achr8P15030_001	Banana	cytosol	44.89	88.67
GSMUA_Achr11P...	Banana	cytosol	44.64	88.18
KRH40178	Soybean	endoplasmic reticulum	44.39	88.12
AT1G02130.1	Thale cress	cytosol	44.14	87.19
Solyc05g052070.2.1	Tomato	unclear	44.14	87.19
Bra012658.1-P	Field mustard	cytosol	43.89	87.13
Bra024956.1-P	Field mustard	cytosol	43.89	87.13
Bra022113.1-P	Field mustard	cytosol	43.89	87.13
Bra017497.1-P	Field mustard	cytosol	43.89	87.13
KRH66494	Soybean	endoplasmic reticulum	43.89	86.7
PGSC0003DMT400041326	Potato	cytosol	43.64	86.21
PGSC0003DMT400034028	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.14	85.22
Solyc05g053940.2.1	Tomato	nucleus, plastid, unclear	43.14	85.22
TraesCS3A01G056800.1	Wheat	cytosol	40.15	85.19
Zm00001d011162_P002	Maize	plasma membrane	42.14	83.25
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	45.64	80.62
Solyc01g090170.2.1	Tomato	unclear	40.65	80.3
Zm00001d003588_P002	Maize	cytosol, extracellular	29.18	78.52
KRH48822	Soybean	cytosol, endoplasmic reticulum	30.42	77.22
CDY38055	Canola	cytosol	43.89	74.26
Zm00001d035741_P002	Maize	cytosol	37.66	73.66
Zm00001d051336_P001	Maize	plastid	49.88	73.53
TraesCS3A01G056900.1	Wheat	mitochondrion	29.68	71.26
GSMUA_Achr7P06570_001	Banana	cytosol	45.64	66.55
HORVU3Hr1G010780.1	Barley	plasma membrane	46.13	66.31
Bra040162.1-P	Field mustard	cytosol	44.14	64.6
Zm00001d005215_P001	Maize	cytosol	24.19	63.82
TraesCS3A01G056700.1	Wheat	cytosol	39.9	62.75
VIT_15s0021g01410.t01	Wine grape	cytosol	31.67	61.95
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	45.64	60.8
Zm00001d010538_P005	Maize	cytosol	30.42	56.74
Zm00001d034638_P001	Maize	cytosol	30.42	56.74
Zm00001d038380_P001	Maize	extracellular, plasma membrane	30.42	56.74
Zm00001d003789_P002	Maize	extracellular, plasma membrane	34.91	53.03
Zm00001d025660_P001	Maize	plasma membrane, plastid	23.19	44.29
Zm00001d017026_P003	Maize	cytosol, endoplasmic reticulum, nucleus	22.69	40.27
Zm00001d050915_P004	Maize	cytosol	22.69	36.69
Zm00001d003347_P003	Maize	cytosol	16.96	36.36

Protein Annotations

EntrezGene:100502159	MapMan:22.8.1.4	Gene3D:3.40.50.300	EntrezGene:542396	UniProt:A0A1D6HEW8	ProteinID:AQK73195.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF666	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000842955F	EnsemblPlantsGene:Zm00001d017456
EnsemblPlants:Zm00001d017456_P003	EnsemblPlants:Zm00001d017456_T003	SEG:seg	:	:	:

Description

ypt homolog4 ypt homolog4

Coordinates

chr5:+:196421600..196439701

Molecular Weight (calculated)

44335.5 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.203

Length

401 amino acids

Sequence
(BLAST)

001: MAAPGSSELA KNEGDGMTNS LVGLWQRDRV LVFNFSDYLF KLLLIGDSGV GKSCLLLRFA DDSYLDSYIS TIGVDFKIRT VEQDGKTIKL QIWDTAGQER
101: FRTITSSYYR GAHGIIIVYD VTDQESFNNV KQWLNEIDRY ASDNVNKLLV GNKSDLTANK VVATETAKAF ADEMGIPFME TSAKNAINVE QAFMAMAASI
201: KDSDYLFKLL LIGDSGVGKS CLLLRFADDS YLDSYISTIG VDFKIRTVEQ DGKTIKLQIW DTAGQERFRT ITSSYYRGAH GIIIVYDVTD QESFNNVKQW
301: LNEIDRYASD NVNKLLVGNK SDLTANKVVA TETAKAFADE MGIPFMETSA KNATNVEQAF MAMAASIKDR MASQPAAANA RPATVQIRGQ PVNQKTSCCS
401: S

Best Arabidopsis Sequence Match ( AT1G02130.1 )
(BLAST)

001: MNPEYDYLFK LLLIGDSGVG KSCLLLRFSD DSYVESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDEESFNNVK
101: QWLSEIDRYA SDNVNKLLVG NKSDLTENRA IPYETAKAFA DEIGIPFMET SAKDATNVEQ AFMAMSASIK ERMASQPAGN NARPPTVQIR GQPVAQKNGC
201: CST

Arabidopsis Description

RABD2ARas-related protein RABD2a [Source:UniProtKB/Swiss-Prot;Acc:P28188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.