Factsheet for GSMUA_Achr3P32240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
endoplasmic reticulum 3
golgi 3
extracellular 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P24260_001	Banana	cytosol	94.06	94.06
GSMUA_Achr2P18340_001	Banana	plasma membrane	88.12	88.12
GSMUA_Achr8P15030_001	Banana	cytosol	87.13	86.7
GSMUA_Achr11P...	Banana	cytosol	85.64	85.22
GSMUA_Achr1P04400_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	85.15	75.77
GSMUA_Achr10P...	Banana	cytosol	74.75	74.75
GSMUA_Achr7P06570_001	Banana	cytosol	85.15	62.55
GSMUA_Achr6P17450_001	Banana	cytosol	77.23	61.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plastid	86.63	58.14
GSMUA_AchrUn_...	Banana	cytosol	59.9	56.02
GSMUA_Achr9P03220_001	Banana	cytosol	59.9	56.02
GSMUA_Achr11P...	Banana	cytosol	59.9	56.02
GSMUA_Achr6P34270_001	Banana	cytosol	59.9	56.02
GSMUA_Achr10P...	Banana	cytosol	59.41	55.56
GSMUA_Achr10P...	Banana	cytosol	58.91	55.09
GSMUA_Achr8P02620_001	Banana	cytosol	58.42	54.63
GSMUA_Achr9P27910_001	Banana	plasma membrane	48.02	45.97
GSMUA_Achr3P04210_001	Banana	cytosol	47.03	45.02
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	29.21	42.45
GSMUA_Achr4P09730_001	Banana	cytosol	42.57	40.76
GSMUA_Achr8P25750_001	Banana	cytosol	40.59	37.1
GSMUA_Achr4P01720_001	Banana	endoplasmic reticulum, extracellular	44.55	36.0

Protein Annotations

MapMan:22.8.1.4	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G32240_001	EnsemblPlants:GSMUA_Achr3P32240_001	EnsemblPlants:GSMUA_Achr3T32240_001
UniProt:M0SJN8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF845	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000296AB13	:

Description

Ras-related protein RIC1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G32240_001]

Coordinates

chr3:-:30172052..30175459

Molecular Weight (calculated)

22444.5 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.330

Length

202 amino acids

Sequence
(BLAST)

001: MTPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYIESYIST IGVDFKIRTV EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK
101: QWLNEIDRYA SENVNKLLVG NKCDLTDGRV VSYETGKAFA DEIGIPFLET SAKDSTNVEK AFMTMAADIK DRMASQPGGS ASKPTTVHMR GQPVGQKSSC
201: CS

Best Arabidopsis Sequence Match ( AT3G11730.1 )
(BLAST)

001: MSNEYDYLFK LLLIGDSSVG KSCLLLRFAD DAYIDSYIST IGVDFKIRTI EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDC TEMESFNNVK
101: QWLSEIDRYA NESVCKLLIG NKNDMVESKV VSTETGRALA DELGIPFLET SAKDSINVEQ AFLTIAGEIK KKMGSQTNAN KTSGPGTVQM KGQPIQQNNG
201: GCCGQ

Arabidopsis Description

RABD1Ras-related protein RABD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZRE2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.