Factsheet for Zm00001d045803_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	89.29	17.99
Solyc02g091970.2.1	Tomato	plastid	75.0	16.71
Zm00001d048539_P001	Maize	mitochondrion, plastid	83.33	15.95
GSMUA_Achr8P05090_001	Banana	plastid	77.38	15.7
CDY68801	Canola	plastid	75.0	15.33
AT3G49680.1	Thale cress	plastid	75.0	15.25
Bra017964.1-P	Field mustard	plastid	73.81	15.12
CDY08161	Canola	endoplasmic reticulum	73.81	15.12
PGSC0003DMT400055202	Potato	plastid	75.0	15.11
KRH28316	Soybean	nucleus, plastid	73.81	15.05
KRH77169	Soybean	nucleus, plastid	72.62	15.02
Zm00001d002694_P004	Maize	endoplasmic reticulum	67.86	15.0
CDX83089	Canola	plastid	73.81	14.98
Bra029966.1-P	Field mustard	plastid	73.81	14.98
Solyc03g043880.2.1	Tomato	plastid	72.62	14.59
PGSC0003DMT400044068	Potato	plastid	72.62	14.56
GSMUA_Achr3P15180_001	Banana	plastid	70.24	14.11
Zm00001d028303_P003	Maize	mitochondrion, plastid	66.67	13.33
CDY54321	Canola	mitochondrion	73.81	12.6
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	1.19	0.93

Protein Annotations

EnsemblPlants:Zm00001d045803_P001	EnsemblPlants:Zm00001d045803_T001	EnsemblPlantsGene:Zm00001d045803	Gene3D:3.30.470.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0016740	InterPro:Aminotransferase-like	PANTHER:PTHR42825
PANTHER:PTHR42825:SF3	ProteinID:AQL03218.1	SUPFAM:SSF56752	TMHMM:TMhelix	UniParc:UPI000844D024	UniProt:A0A1D6NZ57
MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	:	:	:

Description

Branched-chain-amino-acid aminotransferase 3 chloroplastic

Coordinates

chr9:+:40038942..40039376

Molecular Weight (calculated)

9173.5 Da

IEP (calculated)

9.708

GRAVY (calculated)

0.435

Length

84 amino acids

Sequence
(BLAST)

1: MRTCAERMCM PAPSIEQFID AVKQTVLANK RWIPPTGKGS LYIRPLLMGS GAVLGLAPAS EYAFIIFVSL VGNYFKVGTS CFKI

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.