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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:endoplasmic reticulum, peroxisome, plastid
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0549500-00 Rice cytosol 52.68 78.83
CDY68801 Canola plastid 76.59 76.4
VIT_00s0657g00010.t01 Wine grape mitochondrion, peroxisome 20.0 75.93
Zm00001d045803_P001 Maize cytosol, peroxisome, plastid 15.12 73.81
CDX83089 Canola plastid 73.9 73.19
Solyc02g091970.2.1 Tomato plastid 64.63 70.29
AT3G49680.1 Thale cress plastid 70.49 69.98
KRH77169 Soybean nucleus, plastid 66.59 67.24
KRH28316 Soybean nucleus, plastid 67.32 66.99
Os03t0106400-01 Rice plastid 63.41 64.2
KXG40405 Sorghum mitochondrion 62.2 63.12
Os05t0558400-01 Rice plastid 62.68 62.84
PGSC0003DMT400055202 Potato plastid 63.9 62.83
CDY12427 Canola cytosol 25.61 62.5
CDY03587 Canola cytosol 25.61 62.5
CDY54321 Canola mitochondrion 74.39 61.99
TraesCS1D01G211700.1 Wheat plastid 61.95 61.95
TraesCS1A01G208500.1 Wheat plastid 61.95 61.95
TraesCS1B01G222500.1 Wheat plastid 61.71 61.71
CDY45047 Canola peroxisome 25.12 61.68
PGSC0003DMT400044068 Potato plastid 62.93 61.58
HORVU1Hr1G053320.7 Barley plastid 61.71 61.56
Zm00001d029848_P002 Maize endoplasmic reticulum, plasma membrane 62.44 61.39
Solyc03g043880.2.1 Tomato plastid 62.44 61.24
CDY71328 Canola cytosol, peroxisome, plastid 22.93 61.04
GSMUA_Achr8P05090_001 Banana plastid 61.46 60.87
TraesCS4B01G363000.1 Wheat plastid 60.73 60.73
TraesCS5A01G531200.1 Wheat plastid 60.49 60.49
TraesCS4D01G356200.1 Wheat plastid 60.49 60.49
GSMUA_Achr3P15180_001 Banana plastid 59.76 58.61
Zm00001d048539_P001 Maize mitochondrion, plastid 61.95 57.86
CDX99513 Canola mitochondrion 8.29 55.74
CDY31051 Canola mitochondrion 39.02 54.98
CDY16426 Canola cytosol 39.51 54.55
HORVU1Hr1G002790.1 Barley endoplasmic reticulum 33.66 54.33
CDY45046 Canola mitochondrion 31.22 54.24
CDY27928 Canola cytosol 14.39 54.13
Zm00001d002694_P004 Maize endoplasmic reticulum 50.0 53.95
KXG38964 Sorghum plastid 58.05 53.72
CDY20661 Canola mitochondrion 49.02 53.32
CDY31050 Canola mitochondrion 49.02 53.32
CDY03586 Canola plastid 46.34 52.78
CDY28146 Canola cytosol 46.1 52.65
CDY22953 Canola cytosol, peroxisome, plastid 12.93 52.48
CDY69091 Canola mitochondrion, peroxisome, plastid 23.17 52.2
CDY03585 Canola cytosol 45.61 52.09
TraesCS2A01G407900.1 Wheat plastid 51.95 51.95
HORVU4Hr1G087100.5 Barley mitochondrion 60.73 51.88
TraesCS2D01G405200.1 Wheat plastid 51.71 51.71
TraesCS2B01G426100.1 Wheat plastid 51.71 51.71
Os04t0559400-01 Rice plastid 50.0 50.0
CDY22959 Canola cytosol 38.05 49.68
CDY63741 Canola mitochondrion 41.71 48.86
CDY20662 Canola mitochondrion 40.98 48.7
CDY57927 Canola mitochondrion 46.34 48.47
CDY51693 Canola cytosol 42.2 48.06
CDY24619 Canola cytosol 41.71 47.5
CDX82281 Canola cytosol 41.46 47.22
CDY63740 Canola cytosol 50.98 46.14
CDY57926 Canola cytosol 50.73 45.81
HORVU2Hr1G096380.2 Barley plastid 52.68 44.72
KXG26892 Sorghum cytosol, mitochondrion, plastid 50.98 37.79
CDY66609 Canola cytosol 42.44 36.02
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1GO:A0A078F488UniProt:A0A078F488
InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY08161
ProteinID:CDY08161ProteinID:CDY08161.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058GO:GO:0009081GO:GO:0009082
GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00125455001
PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF3MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0004EF0419:::
Description
BnaA06g15650DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078F488]
Coordinates
chrLK031983:+:748264..751051
Molecular Weight (calculated)
45492.0 Da
IEP (calculated)
9.349
GRAVY (calculated)
-0.089
Length
410 amino acids
Sequence
(BLAST)
001: MSDLSAFLLQ QQMVCFFQRD GESNHFPEPE SKLPTLSFTR LNHAPPLILH YSKLIIAFVF LLHQASAFFF QWRNLPYSLQ RRPFQFVFQC GGSRHRLGQH
101: RFSKGELQRF GNIEVSPSAG VLNYGQGLFE GMKAYRKQDG KNILLFRPEE NATRMRSGAE RMCMPAPTVD QFVEAVKATV LANKRWVPPA GKGSLYIRPL
201: LMGTGAVLGL APAPEYTFLV YVSPVGNYFK EGVAPINLIV ESEFHRATPG GTGGVKTIGN YAAVLKAQSI AKSKGYSDVL YLDCVHKRYL EEVSSCNIFI
301: VKDKVISTPE IKGTILPGIT RKSIIDVART QGFKVEERNV TVDELLEADE VFCTGTAVVV SPVGSITHKG KRVSYGEGSF GPVSEKLYTV LTSLQMGLSE
401: DNMNWTVNLS
Best Arabidopsis Sequence Match ( AT3G49680.2 )
(BLAST)
001: MERAAILPSV NQNYLLCPSR AFSTRLHSST RNLSPPSFAS IKHSSSSVSS NGGISLTRCN AVSSNSSSTL VTELADIDWD TVGFGLKPAD YMYVMKCNID
101: GEFSKGELQR FGNIEISPSA GVLNYGQGLF EGLKAYRKKD GNNILLFRPE ENAKRMRNGA ERMCMPAPTV EQFVEAVTET VLANKRWVPP PGKGSLYVRP
201: LLMGTGAVLG LAPAPEYTFI IYVSPVGNYF KEGVAPINLI VENEFHRATP GGTGGVKTIG NYAAVLKAQS IAKAKGYSDV LYLDCIYKRY LEEVSSCNIF
301: IVKDNVISTP EIKGTILPGI TRKSMIDVAR TQGFQVEERN VTVDELLEAD EVFCTGTAVV VSPVGSVTYK GKRVSYGEGT FGTVSKQLYT VLTSLQMGLI
401: EDNMKWTVNL S
Arabidopsis Description
BCAT3Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M401]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.