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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX86457
CDY02487
CDY08216
CDY26148
CDY33093
CDY51405
CDY58518
CDY61477

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G10070.1 CDY02487 AT1G54060.1 21798944
AT1G10070.1 CDY08216 AT1G54060.1 21798944
AT1G10070.1 CDY26148 AT1G54060.1 21798944
AT1G10070.1 CDY33093 AT1G54060.1 21798944
AT1G10070.1 CDY51405 AT1G54060.1 21798944
AT1G10070.1 CDY61477 AT1G54060.1 21798944
AT1G10070.1 CDX86457 AT3G27960.1 21798944
AT1G10070.1 CDY58518 AT3G27960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57926 Canola cytosol 86.98 86.78
CDY20661 Canola mitochondrion 71.52 85.94
CDY31050 Canola mitochondrion 71.08 85.41
AT1G10070.1 Thale cress mitochondrion 71.52 83.51
VIT_18s0001g08430.t01 Wine grape mitochondrion 54.53 63.82
PGSC0003DMT400012703 Potato mitochondrion 51.43 63.49
PGSC0003DMT400030117 Potato cytosol, nucleus, peroxisome 23.62 63.31
CDY31051 Canola mitochondrion 40.62 63.23
VIT_18s0001g08450.t01 Wine grape mitochondrion 53.64 62.79
PGSC0003DMT400012709 Potato mitochondrion 51.66 61.9
Solyc07g021630.2.1 Tomato plastid 51.43 60.84
CDY71328 Canola cytosol, peroxisome, plastid 20.31 59.74
GSMUA_Achr3P15170_001 Banana mitochondrion 50.33 59.69
Solyc04g077240.2.1 Tomato mitochondrion 35.76 59.12
CDY03587 Canola cytosol 21.63 58.33
CDY12427 Canola cytosol 21.63 58.33
CDY45047 Canola peroxisome 21.41 58.08
CDY20662 Canola mitochondrion 43.93 57.68
Solyc12g088220.1.1 Tomato plastid 47.68 56.84
CDY69091 Canola mitochondrion, peroxisome, plastid 22.74 56.59
GSMUA_Achr8P26500_001 Banana mitochondrion 47.68 56.54
CDY45046 Canola mitochondrion 29.36 56.36
CDY63741 Canola mitochondrion 43.27 56.0
CDY28146 Canola cytosol 44.37 55.99
CDY57927 Canola mitochondrion 48.34 55.87
TraesCS4D01G236800.1 Wheat mitochondrion 48.57 55.14
CDY03586 Canola plastid 43.71 55.0
TraesCS4B01G235400.3 Wheat mitochondrion 48.34 54.89
CDY03585 Canola cytosol 43.27 54.6
CDY22953 Canola cytosol, peroxisome, plastid 12.14 54.46
CDX83089 Canola plastid 49.45 54.11
CDY68801 Canola plastid 49.01 54.01
TraesCS4A01G059800.1 Wheat mitochondrion 47.46 53.88
Os03t0231600-01 Rice mitochondrion 49.23 53.73
CDY27928 Canola cytosol 12.8 53.21
CDY16426 Canola cytosol 34.44 52.53
OQU92960 Sorghum mitochondrion 48.12 52.28
CDY22959 Canola cytosol 35.98 51.91
Zm00001d028303_P003 Maize mitochondrion, plastid 47.68 51.43
CDY24619 Canola cytosol 40.62 51.11
CDY08161 Canola endoplasmic reticulum 46.14 50.98
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 49.23 50.34
CDY51693 Canola cytosol 39.96 50.28
PGSC0003DMT400030118 Potato mitochondrion 43.93 49.5
CDX82281 Canola cytosol 39.29 49.44
CDY54321 Canola mitochondrion 49.23 45.33
CDX99513 Canola mitochondrion 5.74 42.62
CDY66609 Canola cytosol 39.07 36.65
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1GO:A0A078J979UniProt:A0A078J979
InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY63740
ProteinID:CDY63740ProteinID:CDY63740.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058GO:GO:0009081GO:GO:0009082
GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00039592001
PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF5MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0004EEC9A5:::
Description
BnaC05g07810DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078J979]
Coordinates
chrLK034345:-:5433..8322
Molecular Weight (calculated)
49782.5 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.288
Length
453 amino acids
Sequence
(BLAST)
001: MVMDEDVGKT NDVERTQRTE VVYPTKTSAS DMAIISQVPP LNLSSSHQGK TNHLFTTKDK GSVIVKMNKT FSSLRKSLVL PLHVHIRTLQ SFSKYNAQAA
101: SALQEERKKP TYQDDNEYAD MDWDNLGFGL TPADYMYVMK CSKDGEFTKG ELSRFGNIQL SPSAGVLNYG QAIYEGTKVY RKENGKLLLF RPDHNAVRME
201: LGAERMLMPS PSVDQFVDAV KQTAFANKRW VPPSGKGSLY IRPLLMGSGP VLGLAPAPEY TFIVYASPVG NYFKEGTAAL NLYVEEEYVR AAPGGAGGVK
301: SITNYAPVLK ALSRAKSRGF SDILYLDAVK KKYLEEASSC NVFVVKGRTI STPATNGTIL EGITRKSVME IASDQGYKVV EKAVHVDEVM DADEVFCTGT
401: AVGVAPVGTI TYQDKRIRYE TGDESVCQKL RSVLVGIQTG TIEDTKGWVT CIN
Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)
001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN
Arabidopsis Description
BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.