CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
nucleus 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69091	Canola	mitochondrion, peroxisome, plastid	68.22	88.46
CDY03587	Canola	cytosol	48.73	68.45
CDY12427	Canola	cytosol	48.73	68.45
CDY45047	Canola	peroxisome	48.31	68.26
CDY03585	Canola	cytosol	96.19	63.23
CDY28146	Canola	cytosol	88.56	58.22
CDY16426	Canola	cytosol	72.88	57.91
CDY03586	Canola	plastid	88.14	57.78
AT1G50110.1	Thale cress	cytosol	86.02	57.02
CDX99513	Canola	mitochondrion	11.86	45.9
CDY27928	Canola	cytosol	19.92	43.12
CDY31051	Canola	mitochondrion	51.69	41.92
KRH49893	Soybean	cytosol	61.86	40.78
KRH49895	Soybean	cytosol	61.44	40.39
KRH42010	Soybean	cytosol	60.59	40.17
CDY24619	Canola	cytosol	60.59	39.72
CDY51693	Canola	cytosol	60.17	39.44
CDX82281	Canola	cytosol	59.75	39.17
CDY22959	Canola	cytosol	51.69	38.85
KRH42008	Soybean	cytosol	60.17	38.38
CDY66609	Canola	cytosol	77.54	37.89
CDY63741	Canola	mitochondrion	52.97	35.71
KRH42003	Soybean	cytosol	50.42	35.52
CDY20662	Canola	mitochondrion	51.69	35.36
GSMUA_Achr3P15170_001	Banana	mitochondrion	55.93	34.55
CDY31050	Canola	mitochondrion	55.08	34.48
GSMUA_Achr8P26500_001	Banana	mitochondrion	55.51	34.29
Os03t0231600-01	Rice	mitochondrion	60.17	34.22
TraesCS4A01G059800.1	Wheat	mitochondrion	57.63	34.09
TraesCS4D01G236800.1	Wheat	mitochondrion	57.63	34.09
CDY20661	Canola	mitochondrion	54.24	33.95
TraesCS4B01G235400.3	Wheat	mitochondrion	57.2	33.83
OQU92960	Sorghum	mitochondrion	56.36	31.89
Zm00001d028303_P003	Maize	mitochondrion, plastid	56.36	31.67
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	59.32	31.6
CDX83089	Canola	plastid	55.08	31.4
CDY57927	Canola	mitochondrion	52.12	31.38
CDY08161	Canola	endoplasmic reticulum	54.24	31.22
CDY68801	Canola	plastid	54.24	31.14
CDY57926	Canola	cytosol	56.78	29.52
CDY63740	Canola	cytosol	56.36	29.36
CDY54321	Canola	mitochondrion	55.51	26.63
CDY71328	Canola	cytosol, peroxisome, plastid	16.95	25.97
CDY22953	Canola	cytosol, peroxisome, plastid	1.27	2.97

Protein Annotations

Gene3D:3.20.10.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	GO:A0A078I5A2
UniProt:A0A078I5A2	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	EnsemblPlants:CDY45046	ProteinID:CDY45046
ProteinID:CDY45046.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00081301001
PFAM:PF01063	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF4	SUPFAM:SSF56752	UniParc:UPI0004EE9CE1
SEG:seg	:	:	:	:	:

Description

BnaA08g02290DBnaA08g02290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5A2]

Coordinates

chrLK032612:-:7513..12872

Molecular Weight (calculated)

25403.7 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.040

Length

236 amino acids

Sequence
(BLAST)

001: MLMQIIFSLR VPPPGKGALY IRPLLIGSGA ILGVAPAPEY TFLIYASPVG DYHKASSGLN LRVDHKSHRA HSGGTGGVKS CTNYSPVVKS LVEAKSSGFS
101: DVLFLDAATG RNIEEASACN IFIVKGNIVS TPPTSGTILP GITRKSISEL ASDIGYQVQE RDVSVEELLE AEEVFCTGTA MVVKAVETVT FHDKKIKYRT
201: GEEALSTKLH LMLTNIQMGI VEDKKSWMVE INGCDE

Best Arabidopsis Sequence Match ( AT1G10070.3 )
(BLAST)

001: MYVMKCSKDG EFTQGELSPY GNIQLSPSAG VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG
101: KGTLYIRPLL MGSGPILGLG PAPEYTFIVY ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE
201: EASSCNVFVV KGRTISTPAT NGTILEGITR KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV
301: GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.