CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49893	Soybean	cytosol	78.37	77.93
KRH49895	Soybean	cytosol	76.97	76.32
KRH42008	Soybean	cytosol	74.72	71.89
CDY71328	Canola	cytosol, peroxisome, plastid	29.78	68.83
CDY22953	Canola	cytosol, peroxisome, plastid	18.54	65.35
Bra018831.1-P	Field mustard	cytosol	63.2	62.67
CDY69091	Canola	mitochondrion, peroxisome, plastid	32.02	62.64
CDY28146	Canola	cytosol	62.64	62.12
CDY45047	Canola	peroxisome	28.93	61.68
Bra014235.1-P	Field mustard	plastid	62.08	61.39
CDY03586	Canola	plastid	61.8	61.11
CDY03585	Canola	cytosol	61.24	60.72
CDY03587	Canola	cytosol	28.65	60.71
CDY12427	Canola	cytosol	28.65	60.71
CDY45046	Canola	mitochondrion	40.17	60.59
AT1G50090.1	Thale cress	cytosol	62.36	60.49
AT1G50110.1	Thale cress	cytosol	60.11	60.11
CDY16426	Canola	cytosol	50.0	59.93
Bra039744.1-P	Field mustard	cytosol	47.19	59.15
CDY22959	Canola	cytosol	51.12	57.96
Bra001761.1-P	Field mustard	cytosol	57.3	56.67
KRH61467	Soybean	mitochondrion	60.96	56.51
KRH42003	Soybean	cytosol	53.09	56.42
CDX82281	Canola	cytosol	57.02	56.39
CDY51693	Canola	cytosol	56.74	56.11
CDY24619	Canola	cytosol	56.46	55.83
Bra022448.1-P	Field mustard	cytosol	55.9	55.28
CDY27928	Canola	cytosol	16.85	55.05
GSMUA_Achr8P26500_001	Banana	mitochondrion	58.99	54.97
AT3G19710.1	Thale cress	cytosol	54.49	54.8
GSMUA_Achr3P15170_001	Banana	mitochondrion	57.58	53.66
TraesCS4D01G236800.1	Wheat	mitochondrion	57.87	51.63
TraesCS4B01G235400.3	Wheat	mitochondrion	57.58	51.38
KRH77169	Soybean	nucleus, plastid	57.87	50.74
TraesCS4A01G059800.1	Wheat	mitochondrion	56.74	50.63
KRH28316	Soybean	nucleus, plastid	58.15	50.24
Os03t0231600-01	Rice	mitochondrion	57.87	49.64
OQU92960	Sorghum	mitochondrion	56.46	48.2
Zm00001d028303_P003	Maize	mitochondrion, plastid	56.74	48.1
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	60.96	46.97
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	57.87	46.5
CDX99513	Canola	mitochondrion	7.58	44.26
CDY66609	Canola	cytosol	55.06	40.58

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	EntrezGene:100775369
Gene3D:3.20.10.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EMBL:ACUP02004784
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:GLYMA_08G063300
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:K7L583	EnsemblPlants:KRH42010	ProteinID:KRH42010
ProteinID:KRH42010.1	ProteinID:KRH42011.1	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825
PANTHER:PTHR42825:SF4	MetaCyc:PWY-5057	MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103
MetaCyc:PWY-5104	MetaCyc:PWY-5108	MetaCyc:PWY-7767	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000295CE63
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:4850677..4855934

Molecular Weight (calculated)

38386.1 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.022

Length

356 amino acids

Sequence
(BLAST)

001: MSLPSVLGNS EDNSKSVAVE NCAGINWDEL GFNPVPTDFM YVMKCAKGEK FSEGSLIPYG NIEISPFAVI LNYGQGIFEG LKAYRTEDGC ILLFRPEENA
101: QRMKIGADRL CMPSPSIDQF VAAVKQTVLA NKRWVPPPGK GSLYIRPLLM GTGASLNLSP APEYTLLIYC SPVTNYHKGS LNLKVESKFY RAISGTGGTG
201: GIKSVTNYAP VYAASIEAKA SGFSDVLFLD SATGKNIEEV SACNVFVVKG NAICTPATNG AILPGITRKS IIEIALDMGY QVTERAISVE EMLDADEVFC
301: TGTAVVVNSV SSVTYKETRT EYKTGPETLS QKLRKTLVGI QTGCIEDTKG WTVRID

Best Arabidopsis Sequence Match ( AT1G50110.2 )
(BLAST)

001: MYVAKCRQGE SFTQGKIVPY GDISISPCSP ILNYGQGLFE GLKAYRTEDD RIRIFRPDQN ALRMQTGAER LCMTPPTLEQ FVEAVKQTVL ANKKWVPPPG
101: KGTLYIRPLL LGSGATLGVA PAPEYTFLIY ASPVGDYHKV SSGLNLKVDH KYHRAHSGGT GGVKSCTNYS PVVKSLLEAK SAGFSDVLFL DAATGRNIEE
201: LTACNIFIVK GNIVSTPPTS GTILPGVTRK SISELAHDIG YQVEERDVSV DELLEAEEVF CTGTAVVVKA VETVTFHDKK VKYRTGEAAL STKLHSMLTN
301: IQMGVVEDKK GWMVDIDPCQ G

Arabidopsis Description

BCAT6Branched-chain-amino-acid aminotransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.