CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039744.1-P	Field mustard	cytosol	85.19	89.08
CDY45046	Canola	mitochondrion	57.91	72.88
CDY69091	Canola	mitochondrion, peroxisome, plastid	44.44	72.53
CDY12427	Canola	cytosol	39.06	69.05
CDY03587	Canola	cytosol	39.06	69.05
CDY45047	Canola	peroxisome	38.72	68.86
CDY03586	Canola	plastid	76.09	62.78
CDY03585	Canola	cytosol	74.75	61.84
AT1G50090.1	Thale cress	cytosol	75.42	61.04
CDY28146	Canola	cytosol	73.4	60.72
CDY71328	Canola	cytosol, peroxisome, plastid	30.98	59.74
CDY27928	Canola	cytosol	21.21	57.8
CDY66609	Canola	cytosol	88.22	54.24
CDY31051	Canola	mitochondrion	50.51	51.55
CDY22959	Canola	cytosol	52.86	50.0
KRH42010	Soybean	cytosol	59.93	50.0
CDY22953	Canola	cytosol, peroxisome, plastid	16.84	49.51
CDX82281	Canola	cytosol	59.26	48.89
CDY24619	Canola	cytosol	59.26	48.89
KRH49893	Soybean	cytosol	58.92	48.88
KRH49895	Soybean	cytosol	58.92	48.75
CDY51693	Canola	cytosol	58.92	48.61
KRH42008	Soybean	cytosol	56.57	45.41
KRH42003	Soybean	cytosol	51.18	45.37
CDY63741	Canola	mitochondrion	52.19	44.29
CDY20662	Canola	mitochondrion	50.51	43.48
CDX99513	Canola	mitochondrion	8.75	42.62
GSMUA_Achr3P15170_001	Banana	mitochondrion	54.55	42.41
CDY31050	Canola	mitochondrion	51.52	40.58
CDY20661	Canola	mitochondrion	51.52	40.58
GSMUA_Achr8P26500_001	Banana	mitochondrion	52.19	40.58
TraesCS4D01G236800.1	Wheat	mitochondrion	54.21	40.35
CDX83089	Canola	plastid	55.56	39.86
TraesCS4A01G059800.1	Wheat	mitochondrion	53.54	39.85
TraesCS4B01G235400.3	Wheat	mitochondrion	53.2	39.6
Os03t0231600-01	Rice	mitochondrion	55.22	39.52
CDY08161	Canola	endoplasmic reticulum	54.55	39.51
CDY68801	Canola	plastid	54.55	39.42
CDY57927	Canola	mitochondrion	51.85	39.29
OQU92960	Sorghum	mitochondrion	53.87	38.37
Zm00001d028303_P003	Maize	mitochondrion, plastid	52.86	37.38
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	54.88	36.79
CDY63740	Canola	cytosol	52.53	34.44
CDY57926	Canola	cytosol	52.53	34.36
CDY54321	Canola	mitochondrion	55.56	33.54

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	GO:A0A078FTS6	UniProt:A0A078FTS6
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlants:CDY16426
ProteinID:CDY16426	ProteinID:CDY16426.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082
GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	EnsemblPlantsGene:GSBRNA2T00090980001
PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF4	MetaCyc:PWY-5057
MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108
SUPFAM:SSF56752	UniParc:UPI0004EDBDC4	:	:	:	:

Description

BnaA02g12300DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FTS6]

Coordinates

chrLK032063:-:566854..569701

Molecular Weight (calculated)

32540.3 Da

IEP (calculated)

5.447

GRAVY (calculated)

0.018

Length

297 amino acids

Sequence
(BLAST)

001: MVPTVHPSSS SCLTSEADEK YANGLFEGLK AYRTQMGRIT LFRPEQNALR MQMGADRLCM TPPSVDQFVE AVKQTVIANK KWVPPPGKGT LYIRPLLIGS
101: GAVLGIASAP EYMFVVYVSP VGNYHKVSSG LNLKSCTNYS PVVKSLREAK SAGFSDVLFL DAATGRNIEE VSTCNIFVVK ENILSTPPIS GTILPGITRK
201: SISELARDIG YQVQERDVSV DELLEAEEVF CKGTAVVVRA VESVTFYETK IIYITGENAL STKLHVMLTN IQKGVVEDTK DWMVEINDTI GIDTFLN

Best Arabidopsis Sequence Match ( AT1G10060.3 )
(BLAST)

001: MFATKSCRDG NFEQGYLSRY GNIELNPAAG ILNYGQGLIE GMKAYRGEDG RVLLFRPELN AMRMKIGAER MCMHSPSVHQ FIEGVKQTVL ANRRWVPPPG
101: KGSLYLRPLL FGSGASLGVA AASEYTFLVF GSPVQNYFKE GTAALNLYVE EVIPRAYLGG TGGVKAISNY GPVLEVMRRA KSRGFSDVLY LDADTGKNIE
201: EVSAANIFLV KGNTIVTPAT SGTILGGITR KSIIEIALDL GYKVEERSVP VEELKEAEEV FCTGTAAGVA SVGSITFKNT RTEYKVGDGI VTQQLRSILV
301: GIQTGSIQDT KDWVLQIA

Arabidopsis Description

ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.