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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019964.1-P Field mustard cytosol 90.82 96.48
CDY63741 Canola mitochondrion 82.65 92.57
CDY31051 Canola mitochondrion 65.05 87.63
CDY20662 Canola mitochondrion 70.92 80.58
AT1G10060.5 Thale cress cytosol 79.08 64.58
KRH61467 Soybean mitochondrion 58.16 59.38
CDY31050 Canola mitochondrion 54.85 57.03
CDY20661 Canola mitochondrion 54.34 56.5
CDY45047 Canola peroxisome 23.72 55.69
CDY03587 Canola cytosol 23.72 55.36
CDY12427 Canola cytosol 23.72 55.36
CDY71328 Canola cytosol, peroxisome, plastid 21.17 53.9
CDY22959 Canola cytosol 42.86 53.5
GSMUA_Achr3P15170_001 Banana mitochondrion 51.53 52.88
CDY69091 Canola mitochondrion, peroxisome, plastid 24.49 52.75
GSMUA_Achr8P26500_001 Banana mitochondrion 51.02 52.36
CDY45046 Canola mitochondrion 31.38 52.12
CDY28146 Canola cytosol 47.7 52.09
CDY03586 Canola plastid 47.7 51.94
CDY16426 Canola cytosol 39.29 51.85
CDY03585 Canola cytosol 47.45 51.81
TraesCS4A01G059800.1 Wheat mitochondrion 51.02 50.13
CDY51693 Canola cytosol 45.66 49.72
KRH52160 Soybean endoplasmic reticulum, plasma membrane, plastid 58.42 49.57
CDY24619 Canola cytosol 45.41 49.44
CDX82281 Canola cytosol 45.15 49.17
CDY27928 Canola cytosol 13.52 48.62
TraesCS4B01G235400.3 Wheat mitochondrion 49.49 48.62
TraesCS4D01G236800.1 Wheat mitochondrion 49.49 48.62
CDY63740 Canola cytosol 55.87 48.34
CDY57926 Canola cytosol 55.61 48.02
Os03t0231600-01 Rice mitochondrion 50.51 47.71
OQU92960 Sorghum mitochondrion 50.51 47.48
CDX83089 Canola plastid 50.0 47.34
CDY68801 Canola plastid 49.49 47.2
CDY22953 Canola cytosol, peroxisome, plastid 11.99 46.53
CDY08161 Canola endoplasmic reticulum 48.47 46.34
CDX99513 Canola mitochondrion 7.14 45.9
Zm00001d028303_P003 Maize mitochondrion, plastid 48.98 45.71
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 50.51 44.7
CDY54321 Canola mitochondrion 49.74 39.63
CDY66609 Canola cytosol 44.9 36.44
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1GO:A0A078IZM0UniProt:A0A078IZM0
InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY57927
ProteinID:CDY57927ProteinID:CDY57927.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058GO:GO:0009081GO:GO:0009082
GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00022859001
PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF5MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0004EF0D2BSEG:seg::
Description
BnaA06g37970DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IZM0]
Coordinates
chrLK033617:-:11092..15528
Molecular Weight (calculated)
42729.2 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.110
Length
392 amino acids
Sequence
(BLAST)
001: MALRCLSQSS TAFSYLSKIC GFRMHGTKAA VSVVEEHVSE MVGTGREDEE YADVDWDNLG FSLVRTDYMF ATRSSGEGNF EQGCLSRYGN IELNPAAGIL
101: NYGQAKASKH GLIEGMKAYR GENGRVLLFR PELNAMRMKK GAERMCMHSP SVQQFIEGVK QTVLANRRWV PPPGKGSLYL RPLLFGSGAS LGLSAASEFT
201: FLVFGSPVQN YFKEGTSALD LYVEEVIPRA YIGGSGGVKA ISNYGPVLEV MRRAKARGFS DVLYLDAETK KNIEEVSASN IFLVKGNTIV TPATTGTILG
301: GITRKSVIEI AIDLGYKVEE RVVPVEELKE AEEVFCTGTA TGVVSVGSIT YQNTRTEYKV GDGLVTQQLR SILVGIQTGS IQDTKNWVLE ID
Best Arabidopsis Sequence Match ( AT1G10060.5 )
(BLAST)
001: MYSQSPIDIF EGIFVVTYKS WLRNLNTEKE NASNFPSSLY IFQPLSVSLP LCSFSNIFFR VGTTSLIIIF STPINKRYIL EFHFGAQTKL VQHSSYMALR
101: RCLPQYSTTS SYLSKIWGFR MHGTKAAASV VEEHVSGAER EDEEYADVDW DNLGFSLVRT DFMFATKSCR DGNFEQGYLS RYGNIELNPA AGILNYGQGL
201: IEGMKAYRGE DGRVLLFRPE LNAMRMKIGA ERMCMHSPSV HQFIEGVKQT VLANRRWVPP PGKGSLYLRP LLFGSGASLG VAAASEYTFL VFGSPVQNYF
301: KEGTAALNLY VEEVIPRAYL GGTGGVKAIS NYGPVLEVMR RAKSRGFSDV LYLDADTGKN IEEVSAANIF LVKGNTIVTP ATSGTILGGI TRKSIIEIAL
401: DLGYKVEERS VPVEELKEAE EVFCTGTAAG VASVGSITFK NTRTEYKVGD GIVTQQLRSI LVGIQTGSIQ DTKDWVLQIA
Arabidopsis Description
ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.