CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31051	Canola	mitochondrion	80.0	94.85
CDY63741	Canola	mitochondrion	79.13	78.0
CDY57927	Canola	mitochondrion	80.58	70.92
AT1G10060.5	Thale cress	cytosol	78.84	56.67
CDY03587	Canola	cytosol	27.25	55.95
CDY12427	Canola	cytosol	27.25	55.95
CDY45047	Canola	peroxisome	26.96	55.69
KRH61467	Soybean	mitochondrion	60.0	53.91
CDY31050	Canola	mitochondrion	57.1	52.25
CDY69091	Canola	mitochondrion, peroxisome, plastid	27.54	52.2
CDY20661	Canola	mitochondrion	56.52	51.72
CDY45046	Canola	mitochondrion	35.36	51.69
CDY27928	Canola	cytosol	16.23	51.38
CDY16426	Canola	cytosol	43.48	50.51
CDY28146	Canola	cytosol	50.72	48.75
CDY03585	Canola	cytosol	50.43	48.47
CDY22959	Canola	cytosol	43.19	47.45
CDY03586	Canola	plastid	48.41	46.39
CDY24619	Canola	cytosol	48.12	46.11
CDY51693	Canola	cytosol	47.54	45.56
GSMUA_Achr3P15170_001	Banana	mitochondrion	50.14	45.29
CDX82281	Canola	cytosol	47.25	45.28
CDY71328	Canola	cytosol, peroxisome, plastid	20.0	44.81
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	59.13	44.16
CDY63740	Canola	cytosol	57.68	43.93
GSMUA_Achr8P26500_001	Banana	mitochondrion	48.41	43.72
CDY57926	Canola	cytosol	57.39	43.61
TraesCS4A01G059800.1	Wheat	mitochondrion	49.57	42.86
CDX83089	Canola	plastid	51.3	42.75
TraesCS4D01G236800.1	Wheat	mitochondrion	49.28	42.61
TraesCS4B01G235400.3	Wheat	mitochondrion	48.7	42.11
CDY68801	Canola	plastid	50.14	42.09
CDX99513	Canola	mitochondrion	7.25	40.98
CDY08161	Canola	endoplasmic reticulum	48.7	40.98
Os03t0231600-01	Rice	mitochondrion	48.99	40.72
OQU92960	Sorghum	mitochondrion	48.99	40.53
Zm00001d028303_P003	Maize	mitochondrion, plastid	48.99	40.24
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	49.28	38.37
CDY22953	Canola	cytosol, peroxisome, plastid	11.01	37.62
CDY54321	Canola	mitochondrion	50.72	35.57
CDY66609	Canola	cytosol	48.12	34.37

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	GO:A0A078G6R7	UniProt:A0A078G6R7
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlants:CDY20662
ProteinID:CDY20662	ProteinID:CDY20662.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082
GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	EnsemblPlantsGene:GSBRNA2T00012847001
PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5	MetaCyc:PWY-5057
MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0004EEFFC7	SEG:seg	:	:

Description

BnaC08g13960DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078G6R7]

Coordinates

chrLK032110:-:507736..510473

Molecular Weight (calculated)

37654.6 Da

IEP (calculated)

6.929

GRAVY (calculated)

-0.001

Length

345 amino acids

Sequence
(BLAST)

001: MALRCLLKSP TTSPYISKIC GFRMHGTKAV ASVVEEHVSA MLRSEREDGE YADVDWDNLG FSLGLIEGMK AYRGEDGRVL MFRPELNAMR MKNGAERMCM
101: HSPSVQQFME GVKQTVLANK RWVPPPGKGS LYLRPLLFGS GASLGVSAAS EYTFVVFGSP VQNYFKEGTA ALNLYVEEVV PRAYIGGTGA VKAISNYGPV
201: LDAVRRAKAR GFSDVLYLDA ETKKNIEEVS AANIFLVKGN TIVTPATNGT ILRGIIRESV IEIALDLGYK VEERVVPVEE LKEAEEVFCT GTAAGIASVG
301: SITFQNIRTE YKVGDGLVTQ QLRSILVGIQ TGSIQDTKHW ILVID

Best Arabidopsis Sequence Match ( AT1G10060.5 )
(BLAST)

001: MYSQSPIDIF EGIFVVTYKS WLRNLNTEKE NASNFPSSLY IFQPLSVSLP LCSFSNIFFR VGTTSLIIIF STPINKRYIL EFHFGAQTKL VQHSSYMALR
101: RCLPQYSTTS SYLSKIWGFR MHGTKAAASV VEEHVSGAER EDEEYADVDW DNLGFSLVRT DFMFATKSCR DGNFEQGYLS RYGNIELNPA AGILNYGQGL
201: IEGMKAYRGE DGRVLLFRPE LNAMRMKIGA ERMCMHSPSV HQFIEGVKQT VLANRRWVPP PGKGSLYLRP LLFGSGASLG VAAASEYTFL VFGSPVQNYF
301: KEGTAALNLY VEEVIPRAYL GGTGGVKAIS NYGPVLEVMR RAKSRGFSDV LYLDADTGKN IEEVSAANIF LVKGNTIVTP ATSGTILGGI TRKSIIEIAL
401: DLGYKVEERS VPVEELKEAE EVFCTGTAAG VASVGSITFK NTRTEYKVGD GIVTQQLRSI LVGIQTGSIQ DTKDWVLQIA

Arabidopsis Description

ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.