Factsheet for GSMUA_Achr8P26500_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001
GSMUA_Achr3P05880_001
GSMUA_Achr8P23650_001
GSMUA_Achr9P14340_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	GSMUA_Achr3P05880_001	AT1G54060.1	21798944
AT1G10070.1	GSMUA_Achr8P23650_001	AT1G54060.1	21798944
AT1G10070.1	GSMUA_Achr9P14340_001	AT1G54060.1	21798944
AT1G10070.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT1G10070.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P15170_001	Banana	mitochondrion	78.53	78.53
Os03t0231600-01	Rice	mitochondrion	68.32	62.89
TraesCS4D01G236800.1	Wheat	mitochondrion	65.18	62.41
TraesCS4A01G059800.1	Wheat	mitochondrion	65.18	62.41
TraesCS4B01G235400.3	Wheat	mitochondrion	64.4	61.65
OQU92960	Sorghum	mitochondrion	67.28	61.63
Zm00001d028303_P003	Maize	mitochondrion, plastid	65.97	60.0
CDY71328	Canola	cytosol, peroxisome, plastid	24.08	59.74
PGSC0003DMT400012703	Potato	mitochondrion	57.33	59.67
KRH42010	Soybean	cytosol	54.97	58.99
KRH49895	Soybean	cytosol	54.97	58.5
KRH61467	Soybean	mitochondrion	58.64	58.33
Solyc07g021630.2.1	Tomato	plastid	58.38	58.22
KRH49893	Soybean	cytosol	54.45	58.1
Solyc04g077240.2.1	Tomato	mitochondrion	40.84	56.93
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	65.97	56.88
PGSC0003DMT400012709	Potato	mitochondrion	56.28	56.88
CDY31050	Canola	mitochondrion	55.76	56.5
Bra019963.1-P	Field mustard	cytosol	56.81	56.36
Bra018463.1-P	Field mustard	mitochondrion	55.5	56.23
AT1G10070.1	Thale cress	mitochondrion	56.81	55.93
CDY20661	Canola	mitochondrion	54.97	55.7
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	24.61	55.62
GSMUA_Achr8P05090_001	Banana	plastid	60.21	55.56
CDY45046	Canola	mitochondrion	34.29	55.51
CDY03587	Canola	cytosol	24.35	55.36
CDY12427	Canola	cytosol	24.35	55.36
CDY31051	Canola	mitochondrion	42.15	55.33
Bra031699.1-P	Field mustard	mitochondrion	54.71	55.0
Bra018831.1-P	Field mustard	cytosol	51.31	54.6
KRH42008	Soybean	cytosol	52.88	54.59
CDY45047	Canola	peroxisome	23.82	54.49
KRH42003	Soybean	cytosol	47.64	54.33
CDY03585	Canola	cytosol	51.05	54.32
CDY28146	Canola	cytosol	50.79	54.04
Bra019964.1-P	Field mustard	cytosol	52.09	53.93
Bra014235.1-P	Field mustard	plastid	50.79	53.89
CDY03586	Canola	plastid	50.79	53.89
AT1G50110.1	Thale cress	cytosol	49.74	53.37
Solyc12g088220.1.1	Tomato	plastid	52.88	53.16
AT1G50090.1	Thale cress	cytosol	51.05	53.13
GSMUA_Achr3P15180_001	Banana	plastid	57.59	52.63
CDY22959	Canola	cytosol	42.93	52.23
CDY69091	Canola	mitochondrion, peroxisome, plastid	24.87	52.2
CDY16426	Canola	cytosol	40.58	52.19
Bra022448.1-P	Field mustard	cytosol	48.95	51.94
CDY51693	Canola	cytosol	48.69	51.67
CDY22953	Canola	cytosol, peroxisome, plastid	13.61	51.49
CDX82281	Canola	cytosol	48.43	51.39
CDY27928	Canola	cytosol	14.66	51.38
Bra001761.1-P	Field mustard	cytosol	48.17	51.11
Bra039744.1-P	Field mustard	cytosol	37.96	51.06
CDY57927	Canola	mitochondrion	52.36	51.02
CDY24619	Canola	cytosol	47.91	50.83
CDY63741	Canola	mitochondrion	45.55	49.71
Bra018464.1-P	Field mustard	mitochondrion	44.76	49.57
AT3G19710.1	Thale cress	cytosol	45.29	48.87
CDY20662	Canola	mitochondrion	43.72	48.41
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	58.38	48.27
CDY57926	Canola	cytosol	57.07	48.02
CDY63740	Canola	cytosol	56.54	47.68
CDX99513	Canola	mitochondrion	7.59	47.54
PGSC0003DMT400030118	Potato	mitochondrion	48.69	46.27
AT1G10060.5	Thale cress	cytosol	52.62	41.88
CDY66609	Canola	cytosol	45.03	35.61
VIT_00s0558g00010.t01	Wine grape	plastid	10.47	29.2

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081
GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656
EnsemblPlantsGene:GSMUA_Achr8G26500_001	EnsemblPlants:GSMUA_Achr8P26500_001	EnsemblPlants:GSMUA_Achr8T26500_001	UniProt:M0TTV3	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF6	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0002962B56
SEG:seg	:	:	:	:	:

Description

Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G26500_001]

Coordinates

chr8:+:30020369..30025622

Molecular Weight (calculated)

42338.9 Da

IEP (calculated)

8.161

GRAVY (calculated)

-0.140

Length

382 amino acids

Sequence
(BLAST)

001: MSARRVLVPA STNILYRLTS WRRIASRSAS SFHQPCVGTA RSNEENADIN WDDLGFGHVP TDYMYVMRCS RDDKFSSGVL NRYGNIELSP SAGVLNYGQG
101: LFEGLKAYQK QDGSGFLLFR PEENARRMQR GAERMCMPSL SVVQFIHAVK ETVLANKRWV PPQGKGSLYI RPLLIGIGPV LGLAPAPDYM FLIYAAPVGT
201: YFKEGLAPIN LVIDDKIHRA TPGGTGDVKT ISNYAPALKA QTEAKTKGFT DVIYLDSINK KYLEEASSCN LFIVKGDVIS TPATMGTILP GVTRKSIIEI
301: AIDYGFRVEE RLVSLEDLLD ADEVFCTGTA VVVAPVSSIT YQDQRYEYKT GTETVTQKLY NILTAIQMGL VEDRKNWTVE IK

Best Arabidopsis Sequence Match ( AT3G49680.1 )
(BLAST)

001: MERAAILPSV NQNYLLCPSR AFSTRLHSST RNLSPPSFAS IKLQHSSSSV SSNGGISLTR CNAVSSNSSS TLVTELADID WDTVGFGLKP ADYMYVMKCN
101: IDGEFSKGEL QRFGNIEISP SAGVLNYGQG LFEGLKAYRK KDGNNILLFR PEENAKRMRN GAERMCMPAP TVEQFVEAVT ETVLANKRWV PPPGKGSLYV
201: RPLLMGTGAV LGLAPAPEYT FIIYVSPVGN YFKEGVAPIN LIVENEFHRA TPGGTGGVKT IGNYAAVLKA QSIAKAKGYS DVLYLDCIYK RYLEEVSSCN
301: IFIVKDNVIS TPEIKGTILP GITRKSMIDV ARTQGFQVEE RNVTVDELLE ADEVFCTGTA VVVSPVGSVT YKGKRVSYGE GTFGTVSKQL YTVLTSLQMG
401: LIEDNMKWTV NLS

Arabidopsis Description

BCAT3Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M401]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.