Factsheet for Bra018463.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014370.1-P
Bra025315.1-P
Bra030909.1-P
Bra037960.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	Bra014370.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra030909.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra037960.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra025315.1-P	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31050	Canola	mitochondrion	99.73	99.73
AT1G10070.1	Thale cress	mitochondrion	90.19	87.63
Bra019963.1-P	Field mustard	cytosol	86.47	84.68
Bra031699.1-P	Field mustard	mitochondrion	85.15	84.47
VIT_18s0001g08430.t01	Wine grape	mitochondrion	65.78	64.08
VIT_18s0001g08450.t01	Wine grape	mitochondrion	64.99	63.31
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	28.12	62.72
PGSC0003DMT400012703	Potato	mitochondrion	60.74	62.4
Solyc07g021630.2.1	Tomato	plastid	62.6	61.62
PGSC0003DMT400012709	Potato	mitochondrion	60.74	60.58
Bra019964.1-P	Field mustard	cytosol	56.5	57.72
Solyc04g077240.2.1	Tomato	mitochondrion	41.91	57.66
Bra018464.1-P	Field mustard	mitochondrion	52.52	57.39
GSMUA_Achr3P15170_001	Banana	mitochondrion	57.56	56.81
Bra018831.1-P	Field mustard	cytosol	53.05	55.71
GSMUA_Achr8P26500_001	Banana	mitochondrion	56.23	55.5
Solyc12g088220.1.1	Tomato	plastid	55.7	55.26
TraesCS4D01G236800.1	Wheat	mitochondrion	57.03	53.88
TraesCS4B01G235400.3	Wheat	mitochondrion	57.03	53.88
TraesCS4A01G059800.1	Wheat	mitochondrion	55.97	52.88
Os03t0231600-01	Rice	mitochondrion	58.09	52.77
Bra017964.1-P	Field mustard	plastid	57.29	52.68
Bra014235.1-P	Field mustard	plastid	50.13	52.5
OQU92960	Sorghum	mitochondrion	57.03	51.56
Bra029966.1-P	Field mustard	plastid	56.23	51.21
Bra039744.1-P	Field mustard	cytosol	38.46	51.06
Zm00001d028303_P003	Maize	mitochondrion, plastid	56.76	50.95
Bra022448.1-P	Field mustard	cytosol	47.48	49.72
Bra001761.1-P	Field mustard	cytosol	47.21	49.44
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	57.56	48.98
PGSC0003DMT400030118	Potato	mitochondrion	50.93	47.76

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:Bra018463	EnsemblPlants:Bra018463.1	EnsemblPlants:Bra018463.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:M4DPM2	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000254801D
SEG:seg	:	:	:	:	:

Description

AT1G10070 (E=2e-184) ATBCAT-2 | ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic

Coordinates

chrA05:-:8322667..8324562

Molecular Weight (calculated)

41222.3 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.201

Length

377 amino acids

Sequence
(BLAST)

001: MFKAISSLRK SLVLPLHSNI RTLQTFSKYN AQAASALREK PLYQDEEYAD VDWDNLGFGL TPADYMYVMK CSKDGEFTQG EISRFGNIQL SPSAGAIYEG
101: TKAYRKENGK LLLFRPDHNA VRMQLGAERM LMPSPSVDQF VDAVKQTAYA NKRWVPPSGK GSLYIRPLLM GSGPILGLGP SPEYTFIVYA SPVGNYFKEG
201: IAALNLYVEE EYVRAAPGGA GGVKSITNYA PVLKALSRAK SRGVSDVLYL DSVKKKYLEE ASSCNVFVVK GRTISTPATN GTILEGVTRK SVMEIASDQG
301: YEVVEKSVHV DEVMDADEVF CTGTAVGVAP VGTITYQDKR VEYETGDESV CQKLRSVLVG IQTGSIEDTK GWVTCIN

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.