Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 8
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g00720.t01 | |
| VIT_14s0066g01280.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10070.1 | VIT_09s0002g00720.t01 | AT1G54060.1 | 21798944 |
| AT1G10070.1 | VIT_14s0066g01280.t01 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g08450.t01 | Wine grape | mitochondrion | 82.69 | 82.69 |
| PGSC0003DMT400012703 | Potato | mitochondrion | 63.57 | 67.03 |
| CDY20661 | Canola | mitochondrion | 64.6 | 66.31 |
| CDY31050 | Canola | mitochondrion | 64.34 | 66.05 |
| Bra018463.1-P | Field mustard | mitochondrion | 64.08 | 65.78 |
| AT1G10070.1 | Thale cress | mitochondrion | 65.89 | 65.72 |
| Bra019963.1-P | Field mustard | cytosol | 64.86 | 65.19 |
| PGSC0003DMT400030117 | Potato | cytosol, nucleus, peroxisome | 28.42 | 65.09 |
| PGSC0003DMT400012709 | Potato | mitochondrion | 63.57 | 65.08 |
| Solyc07g021630.2.1 | Tomato | plastid | 64.08 | 64.75 |
| Bra031699.1-P | Field mustard | mitochondrion | 63.57 | 64.74 |
| Solyc04g077240.2.1 | Tomato | mitochondrion | 44.19 | 62.41 |
| Solyc12g088220.1.1 | Tomato | plastid | 58.91 | 60.0 |
| CDY57926 | Canola | cytosol | 64.86 | 55.29 |
| CDY63740 | Canola | cytosol | 63.82 | 54.53 |
| PGSC0003DMT400030118 | Potato | mitochondrion | 55.04 | 52.99 |
| VIT_00s0657g00010.t01 | Wine grape | mitochondrion, peroxisome | 14.47 | 51.85 |
| VIT_00s0558g00010.t01 | Wine grape | plastid | 10.08 | 28.47 |
Protein Annotations
| KEGG:00270+2.6.1.42 | KEGG:00280+2.6.1.42 | KEGG:00290+2.6.1.42 | KEGG:00770+2.6.1.42 | KEGG:00966+2.6.1.42 | EntrezGene:100260903 |
| wikigene:100260903 | Gene3D:3.20.10.10 | Gene3D:3.30.470.10 | MapMan:4.1.2.2.8.6 | MapMan:4.1.3.2.4 | MapMan:4.2.7.1 |
| InterPro:Aminotrans_IV | InterPro:Aminotrans_IV_CS | InterPro:Aminotransferase-like | InterPro:BCAT_family | InterPro:B_amino_transII | ProteinID:CBI19345 |
| ProteinID:CBI19345.3 | UniProt:E0CNW7 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004084 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009081 |
| GO:GO:0009082 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0052654 | GO:GO:0052655 | GO:GO:0052656 |
| EntrezGene:LOC100260903 | wikigene:LOC100260903 | PFAM:PF01063 | PIRSF:PIRSF006468 | ScanProsite:PS00770 | PANTHER:PTHR42825 |
| PANTHER:PTHR42825:SF5 | SUPFAM:SSF56752 | TIGR:TC59031 | TIGRFAMs:TIGR01123 | UniParc:UPI000198541A | ArrayExpress:VIT_18s0001g08430 |
| EnsemblPlantsGene:VIT_18s0001g08430 | EnsemblPlants:VIT_18s0001g08430.t01 | unigene:Vvi.17004 | RefSeq:XP_002285511 | RefSeq:XP_002285511.1 | : |
Description
Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:E0CNW7]
Coordinates
chr18:+:6893297..6896731
Molecular Weight (calculated)
42529.7 Da
IEP (calculated)
6.166
GRAVY (calculated)
-0.253
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MISRRACFRN LIQSLRTGST ASKLRSSNCY TSRTAPSLQP VVELSPDSDD EYADVDWDNL GFSLRPTDYM YITKCSGGDS FEEGHLSRYG NIELSPSAGV
101: LNYGQGLFEG TKAYRRENGR LCLFRPDQNA IRMQAGAERM CMPSPSIHQF VEAVKQTAFA NKRWIPPPGK GSLYIRPLLM GSGPVLGLGP APECTFLIYA
201: SPVGNYFKEG LAPLNLFIDD EYHRATRGGA GGVKTITNYS PVLKALTRAK SRGFSDVLYL DSVYKKNIEE VSSCNVFIVK DNVISTPATG GTILEGVTRK
301: SIVDIALDHG YQVKEQCIPV EEVMEADEVF CTGTAVGVAA VGSITYQGKR VEYKMGDQCV SQELFSTYMG IQKGDIEDKK GWILEID
101: LNYGQGLFEG TKAYRRENGR LCLFRPDQNA IRMQAGAERM CMPSPSIHQF VEAVKQTAFA NKRWIPPPGK GSLYIRPLLM GSGPVLGLGP APECTFLIYA
201: SPVGNYFKEG LAPLNLFIDD EYHRATRGGA GGVKTITNYS PVLKALTRAK SRGFSDVLYL DSVYKKNIEE VSSCNVFIVK DNVISTPATG GTILEGVTRK
301: SIVDIALDHG YQVKEQCIPV EEVMEADEVF CTGTAVGVAA VGSITYQGKR VEYKMGDQCV SQELFSTYMG IQKGDIEDKK GWILEID
001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN
Arabidopsis Description
BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.