Factsheet for VIT_00s0657g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0549500-00	Rice	cytosol	75.93	29.93
Solyc02g091970.2.1	Tomato	plastid	81.48	23.34
KRH77169	Soybean	nucleus, plastid	85.19	22.66
KRH28316	Soybean	nucleus, plastid	86.11	22.57
Solyc03g043880.2.1	Tomato	plastid	83.33	21.53
GSMUA_Achr8P05090_001	Banana	plastid	82.41	21.5
PGSC0003DMT400055202	Potato	plastid	82.41	21.34
PGSC0003DMT400044068	Potato	plastid	82.41	21.24
GSMUA_Achr3P15180_001	Banana	plastid	81.48	21.05
HORVU1Hr1G053320.7	Barley	plastid	78.7	20.68
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	79.63	20.62
KXG40405	Sorghum	mitochondrion	76.85	20.54
TraesCS5A01G531200.1	Wheat	plastid	77.78	20.49
Os03t0106400-01	Rice	plastid	75.93	20.25
TraesCS4D01G356200.1	Wheat	plastid	76.85	20.24
TraesCS1A01G208500.1	Wheat	plastid	76.85	20.24
CDY68801	Canola	plastid	76.85	20.19
AT3G49680.1	Thale cress	plastid	76.85	20.1
Os05t0558400-01	Rice	plastid	75.93	20.05
TraesCS1B01G222500.1	Wheat	plastid	75.93	20.0
TraesCS1D01G211700.1	Wheat	plastid	75.93	20.0
CDY08161	Canola	endoplasmic reticulum	75.93	20.0
CDX83089	Canola	plastid	75.93	19.81
TraesCS4B01G363000.1	Wheat	plastid	75.0	19.76
Bra017964.1-P	Field mustard	plastid	75.0	19.76
Bra029966.1-P	Field mustard	plastid	75.0	19.57
Zm00001d048539_P001	Maize	mitochondrion, plastid	75.93	18.68
Zm00001d002694_P004	Maize	endoplasmic reticulum	62.96	17.89
HORVU4Hr1G087100.5	Barley	mitochondrion	75.93	17.08
TraesCS2A01G407900.1	Wheat	plastid	63.89	16.83
TraesCS2B01G426100.1	Wheat	plastid	62.96	16.59
TraesCS2D01G405200.1	Wheat	plastid	62.96	16.59
CDY54321	Canola	mitochondrion	75.0	16.46
Os04t0559400-01	Rice	plastid	61.11	16.1
VIT_18s0001g08450.t01	Wine grape	mitochondrion	54.63	15.25
KXG38964	Sorghum	plastid	62.04	15.12
VIT_18s0001g08430.t01	Wine grape	mitochondrion	51.85	14.47
HORVU2Hr1G096380.2	Barley	plastid	63.89	14.29
KXG26892	Sorghum	cytosol, mitochondrion, plastid	62.96	12.3
Zm00001d045803_P001	Maize	cytosol, peroxisome, plastid	0.93	1.19
VIT_00s0558g00010.t01	Wine grape	plastid	0.0	0.0
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

EntrezGene:100853545	wikigene:100853545	Gene3D:3.20.10.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1
InterPro:Aminotrans_IV	InterPro:Aminotransferase-like	ProteinID:CBI23506	ProteinID:CBI23506.3	ncoils:Coil	UniProt:D7SZ21
EMBL:FN595289	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EntrezGene:LOC100853545
wikigene:LOC100853545	PFAM:PF01063	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SUPFAM:SSF56752	TIGR:TC59584
UniParc:UPI0001BE2532	ArrayExpress:VIT_00s0657g00010	EnsemblPlantsGene:VIT_00s0657g00010	EnsemblPlants:VIT_00s0657g00010.t01	unigene:Vvi.746	RefSeq:XP_003635447
RefSeq:XP_003635447.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:33692155..33695582

Molecular Weight (calculated)

11690.1 Da

IEP (calculated)

4.690

GRAVY (calculated)

0.082

Length

108 amino acids

Sequence
(BLAST)

001: GNVISTPSIK GTILPGITRK SIIDVARSQG FQVEERPVSV DELLDADEVF CTGTAVVVSP VGSITYLGKR VSYQNNGIGV VSQQLYSALT RLQMGLTEDV
101: MNWTMELK

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.