Factsheet for PGSC0003DMT400044068

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g043880.2.1	Tomato	plastid	90.45	90.67
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	21.24	82.41
PGSC0003DMT400055202	Potato	plastid	78.52	78.9
Os10t0549500-00	Rice	cytosol	49.88	76.28
Zm00001d045803_P001	Maize	cytosol, peroxisome, plastid	14.56	72.62
KRH77169	Soybean	nucleus, plastid	67.78	69.95
KRH28316	Soybean	nucleus, plastid	67.78	68.93
Bra017964.1-P	Field mustard	plastid	67.3	68.78
AT3G49680.1	Thale cress	plastid	67.54	68.52
CDY68801	Canola	plastid	66.83	68.13
CDX83089	Canola	plastid	66.35	67.15
Bra029966.1-P	Field mustard	plastid	66.35	67.15
GSMUA_Achr8P05090_001	Banana	plastid	63.96	64.73
Os03t0106400-01	Rice	plastid	62.29	64.44
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	63.48	63.79
HORVU1Hr1G053320.7	Barley	plastid	62.53	63.75
TraesCS1B01G222500.1	Wheat	plastid	62.29	63.66
Os05t0558400-01	Rice	plastid	61.81	63.33
TraesCS1A01G208500.1	Wheat	plastid	61.81	63.17
TraesCS1D01G211700.1	Wheat	plastid	61.81	63.17
CDY08161	Canola	endoplasmic reticulum	61.58	62.93
TraesCS4D01G356200.1	Wheat	plastid	61.34	62.68
TraesCS4B01G363000.1	Wheat	plastid	61.1	62.44
TraesCS5A01G531200.1	Wheat	plastid	60.86	62.2
PGSC0003DMT400012703	Potato	mitochondrion	54.42	62.13
KXG40405	Sorghum	mitochondrion	59.43	61.63
GSMUA_Achr3P15180_001	Banana	plastid	59.43	59.57
PGSC0003DMT400012709	Potato	mitochondrion	52.74	58.47
CDY54321	Canola	mitochondrion	66.11	56.3
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	22.67	56.21
Zm00001d048539_P001	Maize	mitochondrion, plastid	58.71	56.04
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	33.89	55.91
KXG38964	Sorghum	plastid	58.47	55.3
Zm00001d002694_P004	Maize	endoplasmic reticulum	50.12	55.26
TraesCS2B01G426100.1	Wheat	plastid	53.94	55.12
TraesCS2D01G405200.1	Wheat	plastid	53.7	54.88
TraesCS2A01G407900.1	Wheat	plastid	53.7	54.88
HORVU4Hr1G087100.5	Barley	mitochondrion	61.1	53.33
Os04t0559400-01	Rice	plastid	50.84	51.95
PGSC0003DMT400030118	Potato	mitochondrion	45.82	47.76
HORVU2Hr1G096380.2	Barley	plastid	53.22	46.17
KXG26892	Sorghum	cytosol, mitochondrion, plastid	52.51	39.78

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081
GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656
UniProt:M1BFJ8	PFAM:PF01063	EnsemblPlantsGene:PGSC0003DMG400017100	PGSC:PGSC0003DMG400017100	EnsemblPlants:PGSC0003DMT400044068	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000294CC86
SEG:seg	:	:	:	:	:

Description

Branched-chain amino acid aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400017100]

Coordinates

chr3:-:6353720..6360420

Molecular Weight (calculated)

45392.5 Da

IEP (calculated)

8.803

GRAVY (calculated)

-0.080

Length

419 amino acids

Sequence
(BLAST)

001: MESGGALAGL HRNPTFHHLL RPPRTAVNNL LSSSSSTYKR HFSPLPLKFQ KQSHFASYSY NCSINDGSAF QVAYSASSAT QSLANIDWDN LGFGVMPTDY
101: MYSMKCSQDG NFSKGELQRF GNIELSPASG ILNYGQGLFE GLKAYKRHDG NILLFRPEEN ALRMKMGAER ICMPSPSVEQ FVEAVKATVL ANERWIPPPG
201: KGSLYIRPLL MGSGAILGVA PAPEYTFLIY VSPVGNYFKE GMAPINLVIE TEMHRATPGG TGGVKTIGNY AAVLKAQSAA KAKGYSDVLY LDSVNKRYLE
301: EVSSCNVFIV KGNLIATPAI KGTILPGITR KSIIDVALSQ GFQVEERQVS VDELLDADEV FCTGTAVVVS PVGSITHLGK RVSYGSDGVG RVSKQLYSTL
401: TSLQMGLATD NMNWTVVLK

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.