CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
endoplasmic reticulum 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048539_P001	Maize	mitochondrion, plastid	94.31	86.79
Os03t0106400-01	Rice	plastid	79.7	79.51
TraesCS4D01G356200.1	Wheat	plastid	78.71	77.56
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	20.54	76.85
TraesCS5A01G531200.1	Wheat	plastid	77.97	76.83
TraesCS4B01G363000.1	Wheat	plastid	77.97	76.83
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	45.3	72.05
Solyc02g091970.2.1	Tomato	plastid	63.86	68.44
GSMUA_Achr8P05090_001	Banana	plastid	69.55	67.87
KRH28316	Soybean	nucleus, plastid	67.33	66.02
KRH77169	Soybean	nucleus, plastid	66.09	65.76
KXG38964	Sorghum	plastid	71.78	65.46
Bra017964.1-P	Field mustard	plastid	65.59	64.63
HORVU4Hr1G087100.5	Barley	mitochondrion	76.73	64.58
CDY68801	Canola	plastid	65.59	64.48
GSMUA_Achr3P15180_001	Banana	plastid	66.09	63.88
AT3G49680.1	Thale cress	plastid	65.1	63.68
CDX83089	Canola	plastid	65.1	63.53
Bra029966.1-P	Field mustard	plastid	64.6	63.04
PGSC0003DMT400055202	Potato	plastid	64.85	62.83
CDY08161	Canola	endoplasmic reticulum	63.12	62.2
Solyc03g043880.2.1	Tomato	plastid	61.63	59.57
PGSC0003DMT400044068	Potato	plastid	61.63	59.43
OQU92960	Sorghum	mitochondrion	56.93	55.16
CDY54321	Canola	mitochondrion	64.85	53.25
KXG26892	Sorghum	cytosol, mitochondrion, plastid	58.91	43.04

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A1B6QR82	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824
GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058
GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655
GO:GO:0052656	EnsemblPlants:KXG40405	ProteinID:KXG40405	ProteinID:KXG40405.1	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	MetaCyc:PWY-5057	MetaCyc:PWY-5076	MetaCyc:PWY-5078
MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108	MetaCyc:PWY-7767	EnsemblPlantsGene:SORBI_3001G540100
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0001C80A11	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:80296726..80301561

Molecular Weight (calculated)

43776.1 Da

IEP (calculated)

8.244

GRAVY (calculated)

0.041

Length

404 amino acids

Sequence
(BLAST)

001: MELRLASRGA LSAAPPLSGC LSRHSLSPWL KIQNHIYPMP SLCYKVRTTA KCHASMATSY VRETSEVTDL DWENLGFGLI ETDFMYVAKC GPDGIFSKGE
101: VLPFGPIALS PSAGVLNYGQ GLFEGLKAYR KADGSILLFR PEENAIRMIS GAERMCMPAP TVEQFVDAVK QTVLANKRWV PPTGKGSLYI RPLLIGSGAV
201: LGLAPAPEYS FIIFVSPVGN YFKEGLSPIN LIVEEKFHRA SPGGTGGVKT IGNYASVLRA QKVAKGKGYS DVLYLDAVHD KYLEEVSSCN IFVVKDNVIS
301: TPAIKGTILP GITRKSIIEV AQSKGFKVEE RLVSVDELLN ADEVFCTGTA VVVSPVGSVT YMGKRAEYGN QGVGVVSQQL YKSLTSLQMG NVEDWMGWTV
401: QLNQ

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.