Factsheet for PGSC0003DMT400055202

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091970.2.1	Tomato	plastid	80.82	89.39
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	21.34	82.41
PGSC0003DMT400044068	Potato	plastid	78.9	78.52
Os10t0549500-00	Rice	cytosol	51.08	77.74
Zm00001d045803_P001	Maize	cytosol, peroxisome, plastid	15.11	75.0
KRH77169	Soybean	nucleus, plastid	70.26	72.17
KRH28316	Soybean	nucleus, plastid	70.98	71.84
Bra017964.1-P	Field mustard	plastid	69.54	70.73
CDX83089	Canola	plastid	68.82	69.32
AT3G49680.1	Thale cress	plastid	68.59	69.25
CDY68801	Canola	plastid	67.87	68.86
Bra029966.1-P	Field mustard	plastid	68.11	68.6
Os03t0106400-01	Rice	plastid	64.99	66.91
HORVU1Hr1G053320.7	Barley	plastid	64.27	65.21
GSMUA_Achr8P05090_001	Banana	plastid	64.51	64.98
KXG40405	Sorghum	mitochondrion	62.83	64.85
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	64.51	64.51
TraesCS4D01G356200.1	Wheat	plastid	63.31	64.39
TraesCS1A01G208500.1	Wheat	plastid	63.07	64.15
TraesCS1B01G222500.1	Wheat	plastid	63.07	64.15
TraesCS4B01G363000.1	Wheat	plastid	63.07	64.15
Os05t0558400-01	Rice	plastid	62.83	64.06
TraesCS5A01G531200.1	Wheat	plastid	62.83	63.9
TraesCS1D01G211700.1	Wheat	plastid	62.83	63.9
CDY08161	Canola	endoplasmic reticulum	62.83	63.9
GSMUA_Achr3P15180_001	Banana	plastid	62.35	62.2
PGSC0003DMT400012703	Potato	mitochondrion	54.68	62.13
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	36.45	59.84
Zm00001d048539_P001	Maize	mitochondrion, plastid	62.11	59.0
PGSC0003DMT400012709	Potato	mitochondrion	53.48	58.99
CDY54321	Canola	mitochondrion	68.35	57.93
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	23.26	57.4
KXG38964	Sorghum	plastid	59.95	56.43
Zm00001d002694_P004	Maize	endoplasmic reticulum	51.32	56.32
TraesCS2A01G407900.1	Wheat	plastid	54.92	55.85
TraesCS2B01G426100.1	Wheat	plastid	54.92	55.85
HORVU4Hr1G087100.5	Barley	mitochondrion	63.79	55.42
TraesCS2D01G405200.1	Wheat	plastid	54.44	55.37
Os04t0559400-01	Rice	plastid	52.04	52.93
PGSC0003DMT400030118	Potato	mitochondrion	46.28	48.01
HORVU2Hr1G096380.2	Barley	plastid	53.96	46.58
KXG26892	Sorghum	cytosol, mitochondrion, plastid	53.72	40.51

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	ProteinID:AAF07192	ProteinID:AAF07192.1
EMBL:AF193846	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:M1BXJ2	PFAM:PF01063	EnsemblPlantsGene:PGSC0003DMG400021425
PGSC:PGSC0003DMG400021425	EnsemblPlants:PGSC0003DMT400055202	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0002962871	SEG:seg	:	:

Description

Branched-chain-amino-acid aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400021425]

Coordinates

chr2:-:42373734..42381213

Molecular Weight (calculated)

45066.3 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.047

Length

417 amino acids

Sequence
(BLAST)

001: MESAAVFAGL HPTPGHHNHP LGPSRTAIKI LPPSIDKINF SPLPLKLQKQ SHFTSYIDNS AINSGNSFRV ASPASDVASE LADIDWDNLG FGFMPTDYMY
101: SMKCSQGENF SKGELQRFGN IELSPSAGIL NYGQGLFEGL KAYRKHDGNI LLFRPEENAT RLKMGAERMC MPSPSVEQFV EAVKATVLAN ERWIPPPGKG
201: SLYIRPLLMG SGAVLGLAPA PEYTFLIYVS PVGNYFKEGL APINLVIETE MHRATPGGTG GVKTIGNYAA VLKAQSAAKA KGYSDVLYLD CVQKKYLEEV
301: SSCNVFIVKG NLIVTPAIKG TILPGITRKS IIDVAISQGF QVEERQVSVD ELLDADEVFC TGTAVVVSPV GSITHQGRRV TYGNDGVGLV SQQLYSALTS
401: LQMGLSEDKM GWIVELK

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.