Factsheet for HORVU1Hr1G002790.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G363000.1	Wheat	plastid	77.95	48.29
TraesCS4D01G356200.1	Wheat	plastid	76.77	47.56
TraesCS5A01G531200.1	Wheat	plastid	76.38	47.32
Os03t0106400-01	Rice	plastid	74.02	46.42
KXG40405	Sorghum	mitochondrion	72.05	45.3
HORVU4Hr1G087100.5	Barley	mitochondrion	79.53	42.08
HORVU1Hr1G053320.7	Barley	plastid	66.54	41.12
Zm00001d048539_P001	Maize	mitochondrion, plastid	70.87	41.0
GSMUA_Achr8P05090_001	Banana	plastid	62.6	38.41
Solyc02g091970.2.1	Tomato	plastid	56.69	38.2
KRH77169	Soybean	nucleus, plastid	61.02	38.18
KRH28316	Soybean	nucleus, plastid	60.63	37.38
Bra017964.1-P	Field mustard	plastid	59.06	36.59
PGSC0003DMT400055202	Potato	plastid	59.84	36.45
AT3G49680.1	Thale cress	plastid	59.06	36.32
CDY68801	Canola	plastid	58.66	36.25
CDX83089	Canola	plastid	58.66	35.99
Bra029966.1-P	Field mustard	plastid	58.27	35.75
GSMUA_Achr3P15180_001	Banana	plastid	58.27	35.41
Solyc03g043880.2.1	Tomato	plastid	55.91	33.97
PGSC0003DMT400044068	Potato	plastid	55.91	33.89
CDY08161	Canola	endoplasmic reticulum	54.33	33.66
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	54.33	31.15
CDY54321	Canola	mitochondrion	58.27	30.08
HORVU2Hr1G096380.2	Barley	plastid	53.54	28.16
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G002790.1	EnsemblPlantsGene:HORVU1Hr1G002790	Gene3D:3.20.10.10	Gene3D:3.30.470.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:Aminotransferase-like	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SEG:seg
SUPFAM:SSF56752	UniParc:UPI000B47860B	UniProt:A0A287EGQ8	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1

Description

No Description!

Coordinates

chrchr1H:+:5594048..5595631

Molecular Weight (calculated)

27835.7 Da

IEP (calculated)

6.516

GRAVY (calculated)

0.046

Length

254 amino acids

Sequence
(BLAST)

001: QKEFIWFVLA PSMSSKKHIF FLLLQVLNIN NIYSTPSLDY KDHTTVGCQA SLATKHMETP EMVDLDWEDL GFGLVNTDFM YLAKCGPDGN FSKGEILPFG
101: PIALSPSAGV LNYGQGLFEG LKAYRKSDGS ILLFRPEENA ERMKIGSERM CMSAPTVEQF VDAVKQTVLA NKRWVPPTAK GSLYIRPLLI GSGAILGLAP
201: SQEYTFIIYV SPVGNYFKEG LAPINLIIED NFHRAAPGGT GGVKTIGNYA SVLV

Best Arabidopsis Sequence Match ( AT1G10070.1 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.