Factsheet for Os03t0106400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0549500-00	Rice	cytosol	57.53	85.04
KXG40405	Sorghum	mitochondrion	79.51	79.7
TraesCS4D01G356200.1	Wheat	plastid	79.26	78.29
TraesCS5A01G531200.1	Wheat	plastid	79.01	78.05
TraesCS4B01G363000.1	Wheat	plastid	78.02	77.07
Os05t0558400-01	Rice	plastid	77.78	77.02
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	20.25	75.93
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	46.42	74.02
Zm00001d048539_P001	Maize	mitochondrion, plastid	78.27	72.21
Solyc02g091970.2.1	Tomato	plastid	65.19	70.03
KRH77169	Soybean	nucleus, plastid	68.64	68.47
KRH28316	Soybean	nucleus, plastid	69.14	67.96
GSMUA_Achr8P05090_001	Banana	plastid	68.4	66.91
HORVU4Hr1G087100.5	Barley	mitochondrion	78.52	66.25
Bra017964.1-P	Field mustard	plastid	66.42	65.61
CDY68801	Canola	plastid	66.42	65.45
PGSC0003DMT400055202	Potato	plastid	66.91	64.99
CDX83089	Canola	plastid	66.17	64.73
AT3G49680.1	Thale cress	plastid	65.43	64.16
Bra029966.1-P	Field mustard	plastid	65.43	64.01
CDY08161	Canola	endoplasmic reticulum	64.2	63.41
PGSC0003DMT400044068	Potato	plastid	64.44	62.29
GSMUA_Achr3P15180_001	Banana	plastid	64.2	62.2
Solyc03g043880.2.1	Tomato	plastid	63.7	61.72
Os03t0231600-01	Rice	mitochondrion	57.28	55.9
Os04t0559400-01	Rice	plastid	55.8	55.12
CDY54321	Canola	mitochondrion	66.17	54.47

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EntrezGene:4331322	ProteinID:AAN60486.1
ProteinID:ABF93535.1	EMBL:AK108687	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	ProteinID:BAF10599.1
ProteinID:BAS81872.1	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081
GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656
EnsemblPlantsGene:Os03g0106400	EnsemblPlants:Os03t0106400-01	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825
PANTHER:PTHR42825:SF3	UniProt:Q8H7T7	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI00000AD29C	RefSeq:XP_015629164.1

Description

Similar to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5). (Os03t0106400-01)

Coordinates

chr3:-:375321..379793

Molecular Weight (calculated)

43958.4 Da

IEP (calculated)

7.436

GRAVY (calculated)

0.015

Length

405 amino acids

Sequence
(BLAST)

001: MELHLTSRGA LPLSPPLAGQ RRPHLSLSTP SLPIKNHTYS VPPPFSKAHC AIGCQASLAT NYMETSAVAD LDWENLGFGL VQTDFMYIAK CGPDGNFSKG
101: EMVPFGPIEL SPSAGVLNYG QGLFEGLKAY RKTDGYILLF RPEENAIRMR NGAERMCMPA PTLEQFVDAV KQTVLANKRW VPPTGKGSLY IRPLLMGSGA
201: VLGLAPAPEY TFMIFVSPVG NYFKEGLAPI NLIIEENFHR AAPGGTGGVK TIGNYASVLK AQRIAKQKGY SDVLYLDAVH KKYLEEVSSC NIFIVKGNVI
301: STPAIKGTIL PGITRKSILE VAQRKGFMVE ERLVSVDELL EADEVFCTGT AVVVSPVGSI TYLGQRVEYG NQGVGVVCQQ LYTSLTSLQM GHVDDCMGWT
401: VELNQ

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.