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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH77169 Soybean nucleus, plastid 93.2 94.58
VIT_00s0657g00010.t01 Wine grape mitochondrion, peroxisome 22.57 86.11
Os10t0549500-00 Rice cytosol 54.13 81.39
Solyc02g091970.2.1 Tomato plastid 70.39 76.92
Bra017964.1-P Field mustard plastid 73.54 73.9
Zm00001d045803_P001 Maize cytosol, peroxisome, plastid 15.05 73.81
AT3G49680.1 Thale cress plastid 73.79 73.61
CDY68801 Canola plastid 72.82 72.99
CDX83089 Canola plastid 72.57 72.22
Bra029966.1-P Field mustard plastid 72.57 72.22
PGSC0003DMT400055202 Potato plastid 71.84 70.98
Os05t0558400-01 Rice plastid 68.93 69.44
Os03t0106400-01 Rice plastid 67.96 69.14
GSMUA_Achr8P05090_001 Banana plastid 69.42 69.08
TraesCS1A01G208500.1 Wheat plastid 67.96 68.29
HORVU1Hr1G053320.7 Barley plastid 67.96 68.13
Solyc03g043880.2.1 Tomato plastid 68.93 67.94
TraesCS1B01G222500.1 Wheat plastid 67.48 67.8
PGSC0003DMT400044068 Potato plastid 68.93 67.78
KXG40405 Sorghum mitochondrion 66.02 67.33
CDY08161 Canola endoplasmic reticulum 66.99 67.32
TraesCS1D01G211700.1 Wheat plastid 66.99 67.32
Zm00001d029848_P002 Maize endoplasmic reticulum, plasma membrane 67.48 66.67
TraesCS4D01G356200.1 Wheat plastid 66.02 66.34
TraesCS4B01G363000.1 Wheat plastid 66.02 66.34
TraesCS5A01G531200.1 Wheat plastid 65.78 66.1
GSMUA_Achr3P15180_001 Banana plastid 65.78 64.83
Zm00001d048539_P001 Maize mitochondrion, plastid 65.05 61.05
HORVU1Hr1G002790.1 Barley endoplasmic reticulum 37.38 60.63
CDY54321 Canola mitochondrion 72.33 60.57
KRH61467 Soybean mitochondrion 55.83 59.9
KXG38964 Sorghum plastid 64.32 59.82
KRH42010 Soybean cytosol 50.24 58.15
Zm00001d002694_P004 Maize endoplasmic reticulum 53.4 57.89
TraesCS2A01G407900.1 Wheat plastid 57.04 57.32
HORVU4Hr1G087100.5 Barley mitochondrion 66.5 57.08
TraesCS2B01G426100.1 Wheat plastid 56.8 57.07
KRH42003 Soybean cytosol 46.36 57.01
KRH49895 Soybean cytosol 49.51 56.82
KRH49893 Soybean cytosol 49.27 56.7
TraesCS2D01G405200.1 Wheat plastid 56.07 56.34
KRH42008 Soybean cytosol 49.27 54.86
Os04t0559400-01 Rice plastid 54.13 54.39
KRH52160 Soybean endoplasmic reticulum, plasma membrane, plastid 56.07 50.0
HORVU2Hr1G096380.2 Barley plastid 57.28 48.86
KXG26892 Sorghum cytosol, mitochondrion, plastid 55.58 41.41
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42EntrezGene:100798328
Gene3D:3.20.10.10Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1EMBL:ACUP02006744
InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyEMBL:BT093913InterPro:B_amino_transII
UniProt:C6T8V8EnsemblPlantsGene:GLYMA_11G045300GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058GO:GO:0009081GO:GO:0009082
GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlants:KRH28316
ProteinID:KRH28316ProteinID:KRH28316.1PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825
PANTHER:PTHR42825:SF3MetaCyc:PWY-5057MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103
MetaCyc:PWY-5104MetaCyc:PWY-5108MetaCyc:PWY-7767SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0001B1638B
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr11:+:3344386..3350248
Molecular Weight (calculated)
45179.5 Da
IEP (calculated)
6.314
GRAVY (calculated)
-0.072
Length
412 amino acids
Sequence
(BLAST)
001: MESSAVYGSI RPSYPICPSR RSSSLLSHQS PFLFEPSLSL KLRKQFPLIS QNFLEAASPL RPSATLSSDS YRETIELADI EWDNLGFGLQ PTDYMYSMKC
101: TRGGTFSKGE LQRFGNIELN PSAGVLNYGQ GLFEGLKAYR KQDGSILLFR PEENGLRMQI GAERMCMPSP TVEQFVEAVK ETVLANKRWV PPAGKGSLYI
201: RPLLMGSGPV LGLAPAPEYT FLIYVSPVGN YFKEGLAPIN LIVENELHRA TPGGTGGVKT IGNYAAVLKA QSEAKAKGYS DVLYLDCVHK RYLEEVSSCN
301: IFVVKGNVIS TPAIKGTILP GITRKSIIDV ARSQGFQVEE RLVSVDELLD ADEVFCTGTA VVVSPVGSIT YLDKRVAYGD GIGVVAQQLY TVLTRLQMGL
401: TEDEMNWTVE LR
Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)
001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS
Arabidopsis Description
ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.