CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0549500-00	Rice	cytosol	51.69	83.58
Os05t0558400-01	Rice	plastid	72.91	78.97
TraesCS1D01G211700.1	Wheat	plastid	70.65	76.34
HORVU1Hr1G053320.7	Barley	plastid	70.65	76.16
TraesCS1B01G222500.1	Wheat	plastid	70.2	75.85
TraesCS1A01G208500.1	Wheat	plastid	70.2	75.85
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	70.2	74.58
KXG40405	Sorghum	mitochondrion	65.46	71.78
GSMUA_Achr8P05090_001	Banana	plastid	60.72	64.98
KRH77169	Soybean	nucleus, plastid	59.14	64.53
Solyc02g091970.2.1	Tomato	plastid	54.85	64.46
KRH28316	Soybean	nucleus, plastid	59.82	64.32
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	15.12	62.04
CDY68801	Canola	plastid	55.76	60.1
PGSC0003DMT400055202	Potato	plastid	56.43	59.95
AT3G49680.1	Thale cress	plastid	55.76	59.81
Bra017964.1-P	Field mustard	plastid	55.3	59.76
GSMUA_Achr3P15180_001	Banana	plastid	55.98	59.33
Bra029966.1-P	Field mustard	plastid	55.08	58.94
CDX83089	Canola	plastid	54.85	58.7
PGSC0003DMT400044068	Potato	plastid	55.3	58.47
CDY08161	Canola	endoplasmic reticulum	53.72	58.05
Solyc03g043880.2.1	Tomato	plastid	54.63	57.89
OQU92960	Sorghum	mitochondrion	50.79	53.96
CDY54321	Canola	mitochondrion	54.63	49.19
KXG26892	Sorghum	cytosol, mitochondrion, plastid	49.44	39.6

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A1B6QM25	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824
GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058
GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655
GO:GO:0052656	EnsemblPlants:KXG38964	ProteinID:KXG38964	ProteinID:KXG38964.1	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	MetaCyc:PWY-5057	MetaCyc:PWY-5076	MetaCyc:PWY-5078
MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108	MetaCyc:PWY-7767	EnsemblPlantsGene:SORBI_3001G305600
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0001C809EB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:58962413..58967718

Molecular Weight (calculated)

47582.3 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.065

Length

443 amino acids

Sequence
(BLAST)

001: MEFGVASHGA VLAAAPLVAR PTWLLLSPPP PASCIQIQNR LYSISSLPLK AGPVRACRAS LASSYTQTTE TVDLDWENLG FGIVQTDYMY IAKCGTDGNF
101: SEGELVPFGP IALSPSSGVL NYGQGLFEGL KAYRKTDGSI LLFRPEENAQ RMQTGAERMC MPAPSVEQFI DAVKQTVLAN KRWIPPTGKG SLYIRPLLMG
201: SGTVLGLAPA PEYTFIIFVS PVGNYFKEGL APINLIVEDK FHRATPGGTG GVKTIGNYAS VLMAQKIAKE KGYSDVLYLD AVHKKYLEEV SSCNIFVVKG
301: NVISTPAVKG TILPGITRKS IIDVALSKGF QVEERLVSVD ELLDADEVFC TGTAVVVSPV GSITYQGKRE FTLQSGIRPP RCWRCVAAAV HFTDESSDGS
401: NRGLDGLDCA TELIDRGSLP TDEFARSSSK TITIMCTSSV TVL

Best Arabidopsis Sequence Match ( AT3G49680.1 )
(BLAST)

001: MERAAILPSV NQNYLLCPSR AFSTRLHSST RNLSPPSFAS IKLQHSSSSV SSNGGISLTR CNAVSSNSSS TLVTELADID WDTVGFGLKP ADYMYVMKCN
101: IDGEFSKGEL QRFGNIEISP SAGVLNYGQG LFEGLKAYRK KDGNNILLFR PEENAKRMRN GAERMCMPAP TVEQFVEAVT ETVLANKRWV PPPGKGSLYV
201: RPLLMGTGAV LGLAPAPEYT FIIYVSPVGN YFKEGVAPIN LIVENEFHRA TPGGTGGVKT IGNYAAVLKA QSIAKAKGYS DVLYLDCIYK RYLEEVSSCN
301: IFIVKDNVIS TPEIKGTILP GITRKSMIDV ARTQGFQVEE RNVTVDELLE ADEVFCTGTA VVVSPVGSVT YKGKRVSYGE GTFGTVSKQL YTVLTSLQMG
401: LIEDNMKWTV NLS

Arabidopsis Description

BCAT3Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M401]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.