Factsheet for Zm00001d029848_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0549500-00	Rice	cytosol	60.67	92.34
Zm00001d045803_P001	Maize	cytosol, peroxisome, plastid	17.99	89.29
Os05t0558400-01	Rice	plastid	81.3	82.89
TraesCS1D01G211700.1	Wheat	plastid	79.86	81.22
HORVU1Hr1G053320.7	Barley	plastid	79.86	81.02
TraesCS1A01G208500.1	Wheat	plastid	79.14	80.49
TraesCS1B01G222500.1	Wheat	plastid	78.9	80.24
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	20.62	79.63
Solyc02g091970.2.1	Tomato	plastid	64.27	71.09
KXG38964	Sorghum	plastid	74.58	70.2
Zm00001d048539_P001	Maize	mitochondrion, plastid	72.9	69.25
KRH77169	Soybean	nucleus, plastid	66.67	68.47
GSMUA_Achr8P05090_001	Banana	plastid	67.87	68.36
KRH28316	Soybean	nucleus, plastid	66.67	67.48
PGSC0003DMT400055202	Potato	plastid	64.51	64.51
Bra017964.1-P	Field mustard	plastid	63.07	64.15
AT3G49680.1	Thale cress	plastid	63.07	63.68
CDY68801	Canola	plastid	62.59	63.5
PGSC0003DMT400044068	Potato	plastid	63.79	63.48
GSMUA_Achr3P15180_001	Banana	plastid	63.55	63.4
CDX83089	Canola	plastid	62.35	62.8
Bra029966.1-P	Field mustard	plastid	62.11	62.56
Solyc03g043880.2.1	Tomato	plastid	62.59	62.44
CDY08161	Canola	endoplasmic reticulum	61.39	62.44
Zm00001d002694_P004	Maize	endoplasmic reticulum	53.72	58.95
Zm00001d028303_P003	Maize	mitochondrion, plastid	55.88	55.48
CDY54321	Canola	mitochondrion	62.83	53.25

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	EntrezGene:100191754
Gene3D:3.20.10.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A1D6K833
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674
GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652
GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654
GO:GO:0052655	GO:GO:0052656	ProteinID:ONL99698.1	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770
PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0008455BB7	EnsemblPlantsGene:Zm00001d029848
EnsemblPlants:Zm00001d029848_P002	EnsemblPlants:Zm00001d029848_T002	SEG:seg	:	:	:

Description

Branched-chain-amino-acid aminotransferase

Coordinates

chr1:+:89930073..89935999

Molecular Weight (calculated)

45217.8 Da

IEP (calculated)

5.501

GRAVY (calculated)

0.124

Length

417 amino acids

Sequence
(BLAST)

001: MEYGAVLAAA PLVARPNWLL LSPPPLAPSI QIQNRLYSIS SFPLKAGPVR ACRALASNYT YDISIIVIAC LVGIYLQTSE TVDLDWENLG FGIVQTDYMY
101: IAKCGTDGNF SEGEMVPFGP IALSPSSGVL NYGQGLFEGL KAYKKTDGSI LLFRPEENAE RMRTGAERMC MPAPSVEQFI DAVKQTVLAN KRWIPPTGKG
201: SLYIRPLLMG SGAVLGLAPA PEYTFIIFVS PVGNYFKEGL APINLIVEDK FHRATPGGTG GVKTIGNYAS VLMAQKIAKE KGYSDVLYLD AVHKKYLEEV
301: SSCNVFVVKD NVISTPAIKG TILPGITRKS IIDVALSKGF QVEERLVSVD ELLDADEVFC TGTAVVVSPV GSITYQGKRV EYGHQGVGVV SQQLYTSLTS
401: LQMGQTEDWM GWTVQLN

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.