Factsheet for Os10t0549500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
endoplasmic reticulum 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	29.93	75.93
Os05t0558400-01	Rice	plastid	98.54	66.01
TraesCS1D01G211700.1	Wheat	plastid	91.61	61.22
TraesCS1B01G222500.1	Wheat	plastid	91.24	60.98
TraesCS1A01G208500.1	Wheat	plastid	91.24	60.98
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	92.34	60.67
HORVU1Hr1G053320.7	Barley	plastid	90.88	60.58
Os03t0106400-01	Rice	plastid	85.04	57.53
Solyc02g091970.2.1	Tomato	plastid	78.1	56.76
KRH77169	Soybean	nucleus, plastid	81.02	54.68
KRH28316	Soybean	nucleus, plastid	81.39	54.13
GSMUA_Achr8P05090_001	Banana	plastid	79.93	52.9
CDY08161	Canola	endoplasmic reticulum	78.83	52.68
Bra017964.1-P	Field mustard	plastid	78.47	52.44
CDY68801	Canola	plastid	78.47	52.31
AT3G49680.1	Thale cress	plastid	78.83	52.3
KXG38964	Sorghum	plastid	83.58	51.69
PGSC0003DMT400055202	Potato	plastid	77.74	51.08
CDX83089	Canola	plastid	77.01	50.97
Bra029966.1-P	Field mustard	plastid	76.64	50.72
GSMUA_Achr3P15180_001	Banana	plastid	76.28	50.0
PGSC0003DMT400044068	Potato	plastid	76.28	49.88
Solyc03g043880.2.1	Tomato	plastid	75.91	49.76
Os03t0231600-01	Rice	mitochondrion	68.98	45.54
Os04t0559400-01	Rice	plastid	66.79	44.63
CDY54321	Canola	mitochondrion	76.64	42.68

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A0P0XXH0	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	ProteinID:BAT11939.1	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674
GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652
GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654
GO:GO:0052655	GO:GO:0052656	EnsemblPlantsGene:Os10g0549500	EnsemblPlants:Os10t0549500-00	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000393AA0C

Description

Similar to Branched-chain-amino-acid aminotransferase. (Os10t0549500-00)

Coordinates

chr10:+:21520864..21524885

Molecular Weight (calculated)

29652.0 Da

IEP (calculated)

8.018

GRAVY (calculated)

0.081

Length

274 amino acids

Sequence
(BLAST)

001: NNSDSILLFR PEENALRMRT GAERMCMPAP SVEQFVDAVK QTVLANKRWV PPTGKGSLYI RPLLMGSGAV LGLAPAPEYT FIIFVSPVGN YFKEGLAPIN
101: LIVEDKFHRA TPGGTGSVKT IGNYASVLMA QKIAKEKGYS DVLYLDAVHK KYLEEVSSCN IFVVKGNVIS TPAVKGTILP GITRKSIIDV ALSKGFQVEE
201: RLVSVDELLE ADEVFCTGTA VVVSPVGSIT YQGKRVEYAG NKGVGVVSQQ LYTSLTSLQM GQAEDWLGWT VQLS

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.