Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0565000-01 | |
| Os02t0708400-01 | |
| Os04t0445600-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10070.1 | Os02t0565000-01 | AT1G54060.1 | 21798944 |
| AT1G10070.1 | Os04t0445600-00 | AT1G54060.1 | 21798944 |
| AT1G10070.1 | Os02t0708400-01 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G059800.1 | Wheat | mitochondrion | 75.18 | 78.2 |
| Zm00001d028303_P003 | Maize | mitochondrion, plastid | 76.14 | 75.24 |
| TraesCS4D01G236800.1 | Wheat | mitochondrion | 71.57 | 74.44 |
| TraesCS4B01G235400.3 | Wheat | mitochondrion | 70.84 | 73.68 |
| OQU92960 | Sorghum | mitochondrion | 73.98 | 73.62 |
| HORVU0Hr1G008950.3 | Barley | cytosol, mitochondrion | 75.9 | 71.11 |
| Os10t0549500-00 | Rice | cytosol | 45.54 | 68.98 |
| GSMUA_Achr3P15170_001 | Banana | mitochondrion | 63.37 | 68.85 |
| GSMUA_Achr8P26500_001 | Banana | mitochondrion | 62.89 | 68.32 |
| CDY12427 | Canola | cytosol | 25.3 | 62.5 |
| CDY03587 | Canola | cytosol | 25.3 | 62.5 |
| PGSC0003DMT400012703 | Potato | mitochondrion | 54.94 | 62.13 |
| CDY45047 | Canola | peroxisome | 24.82 | 61.68 |
| CDY71328 | Canola | cytosol, peroxisome, plastid | 22.41 | 60.39 |
| CDY45046 | Canola | mitochondrion | 34.22 | 60.17 |
| CDY27928 | Canola | cytosol | 15.66 | 59.63 |
| Bra018831.1-P | Field mustard | cytosol | 51.57 | 59.61 |
| CDY28146 | Canola | cytosol | 51.08 | 59.05 |
| PGSC0003DMT400012709 | Potato | mitochondrion | 53.73 | 58.99 |
| CDY69091 | Canola | mitochondrion, peroxisome, plastid | 25.78 | 58.79 |
| PGSC0003DMT400030117 | Potato | cytosol, nucleus, peroxisome | 23.86 | 58.58 |
| CDY31050 | Canola | mitochondrion | 53.01 | 58.36 |
| CDY03585 | Canola | cytosol | 50.36 | 58.22 |
| Bra018463.1-P | Field mustard | mitochondrion | 52.77 | 58.09 |
| KRH61467 | Soybean | mitochondrion | 53.73 | 58.07 |
| AT1G10070.1 | Thale cress | mitochondrion | 54.22 | 57.99 |
| KRH42010 | Soybean | cytosol | 49.64 | 57.87 |
| AT1G50110.1 | Thale cress | cytosol | 49.64 | 57.87 |
| CDY20661 | Canola | mitochondrion | 52.53 | 57.82 |
| Solyc07g021630.2.1 | Tomato | plastid | 53.25 | 57.7 |
| Os05t0558400-01 | Rice | plastid | 56.87 | 57.7 |
| Bra019963.1-P | Field mustard | cytosol | 53.49 | 57.66 |
| KRH49895 | Soybean | cytosol | 49.88 | 57.66 |
| Os03t0106400-01 | Rice | plastid | 55.9 | 57.28 |
| KRH49893 | Soybean | cytosol | 49.4 | 57.26 |
| Solyc04g077240.2.1 | Tomato | mitochondrion | 37.59 | 56.93 |
| KRH42003 | Soybean | cytosol | 45.78 | 56.72 |
| AT1G50090.1 | Thale cress | cytosol | 50.12 | 56.68 |
| CDY22953 | Canola | cytosol, peroxisome, plastid | 13.73 | 56.44 |
| Bra031699.1-P | Field mustard | mitochondrion | 51.57 | 56.32 |
| CDY03586 | Canola | plastid | 48.43 | 55.83 |
| Bra014235.1-P | Field mustard | plastid | 48.19 | 55.56 |
| CDY16426 | Canola | cytosol | 39.52 | 55.22 |
| Bra039744.1-P | Field mustard | cytosol | 37.59 | 54.93 |
| CDY31051 | Canola | mitochondrion | 38.31 | 54.64 |
| KRH42008 | Soybean | cytosol | 48.67 | 54.59 |
| Solyc12g088220.1.1 | Tomato | plastid | 49.64 | 54.21 |
| CDY22959 | Canola | cytosol | 40.96 | 54.14 |
| CDY51693 | Canola | cytosol | 46.75 | 53.89 |
| Bra001761.1-P | Field mustard | cytosol | 46.51 | 53.61 |
| CDX82281 | Canola | cytosol | 46.27 | 53.33 |
| Bra022448.1-P | Field mustard | cytosol | 46.27 | 53.33 |
| CDY24619 | Canola | cytosol | 46.27 | 53.33 |
| Bra019964.1-P | Field mustard | cytosol | 46.75 | 52.57 |
| CDY57927 | Canola | mitochondrion | 47.71 | 50.51 |
| Bra018464.1-P | Field mustard | mitochondrion | 41.45 | 49.86 |
| Os04t0559400-01 | Rice | plastid | 49.16 | 49.76 |
| CDY57926 | Canola | cytosol | 54.22 | 49.56 |
| CDY63740 | Canola | cytosol | 53.73 | 49.23 |
| AT3G19710.1 | Thale cress | cytosol | 41.93 | 49.15 |
| CDY20662 | Canola | mitochondrion | 40.72 | 48.99 |
| KRH52160 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 54.46 | 48.92 |
| PGSC0003DMT400030118 | Potato | mitochondrion | 46.75 | 48.26 |
| CDY63741 | Canola | mitochondrion | 40.48 | 48.0 |
| CDX99513 | Canola | mitochondrion | 6.51 | 44.26 |
| AT1G10060.5 | Thale cress | cytosol | 48.43 | 41.88 |
| CDY66609 | Canola | cytosol | 43.61 | 37.47 |
| VIT_00s0558g00010.t01 | Wine grape | plastid | 9.4 | 28.47 |
Protein Annotations
| KEGG:00270+2.6.1.42 | KEGG:00280+2.6.1.42 | KEGG:00290+2.6.1.42 | KEGG:00770+2.6.1.42 | KEGG:00966+2.6.1.42 | Gene3D:3.20.10.10 |
| Gene3D:3.30.470.10 | MapMan:4.1.2.2.8.6 | MapMan:4.1.3.2.4 | MapMan:4.2.7.1 | EntrezGene:4332151 | ProteinID:AAO00685.1 |
| ProteinID:AAO06962.1 | ProteinID:ABF94785.1 | EMBL:AK105963 | EMBL:AK120579 | InterPro:Aminotrans_IV | InterPro:Aminotrans_IV_CS |
| InterPro:Aminotransferase-like | ProteinID:BAF11375.1 | ProteinID:BAS83103.1 | InterPro:BCAT_family | InterPro:B_amino_transII | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004084 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009081 | GO:GO:0009082 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0052654 |
| GO:GO:0052655 | GO:GO:0052656 | EnsemblPlantsGene:Os03g0231600 | EnsemblPlants:Os03t0231600-01 | PFAM:PF01063 | PIRSF:PIRSF006468 |
| ScanProsite:PS00770 | PANTHER:PTHR42825 | PANTHER:PTHR42825:SF6 | UniProt:Q8GRH8 | SUPFAM:SSF56752 | TIGRFAMs:TIGR01123 |
| UniParc:UPI00000AE5B7 | RefSeq:XP_015630708.1 | SEG:seg | : | : | : |
Description
Similar to Branched-chain-amino-acid aminotransferase 3, chloroplast precursor (EC 2.6.1.42) (Atbcat-3). (Os03t0231600-01)
Coordinates
chr3:+:6948035..6950951
Molecular Weight (calculated)
44744.5 Da
IEP (calculated)
6.996
GRAVY (calculated)
-0.114
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAASS AKRALLPWAR DAHHALARAL QGCGGGGGLG LRGALPTAGG RWSLLQCRWR SSLPQLDSAD RSDEESGGEI DWDNLGFGLT PTDYMYVMRC
101: SLEDGVFSRG ELSRYGNIEL SPSSGVINYG QGLFEGLKAY RAANQQGSYM LFRPEENARR MQHGAERMCM PSPSVEQFVH AVKQTVLANR RWVPPQGKGA
201: LYIRPLLIGS GPILGLAPAP EYTFLIYAAP VGTYFKEGLA PINLVVEDSI HRAMPGGTGG VKTITNYAPV LKAQMDAKSR GFTDVLYLDA VHKTYLEEAS
301: SCNLFIVKDG VVATPATVGT ILPGITRKSV IELARDRGYQ VEERLVSIDD LVGADEVFCT GTAVVVAPVS SVTYHGQRYE FRTGHDTLSQ TLHTTLTSIQ
401: MGLAEDKKGW TVAID
101: SLEDGVFSRG ELSRYGNIEL SPSSGVINYG QGLFEGLKAY RAANQQGSYM LFRPEENARR MQHGAERMCM PSPSVEQFVH AVKQTVLANR RWVPPQGKGA
201: LYIRPLLIGS GPILGLAPAP EYTFLIYAAP VGTYFKEGLA PINLVVEDSI HRAMPGGTGG VKTITNYAPV LKAQMDAKSR GFTDVLYLDA VHKTYLEEAS
301: SCNLFIVKDG VVATPATVGT ILPGITRKSV IELARDRGYQ VEERLVSIDD LVGADEVFCT GTAVVVAPVS SVTYHGQRYE FRTGHDTLSQ TLHTTLTSIQ
401: MGLAEDKKGW TVAID
001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS
Arabidopsis Description
ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.