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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31051 Canola mitochondrion 73.14 87.97
CDY57927 Canola mitochondrion 92.57 82.65
CDY20662 Canola mitochondrion 78.0 79.13
AT1G10060.5 Thale cress cytosol 77.43 56.46
CDY45047 Canola peroxisome 26.86 56.29
CDY03587 Canola cytosol 26.86 55.95
CDY12427 Canola cytosol 26.86 55.95
CDY69091 Canola mitochondrion, peroxisome, plastid 28.0 53.85
CDY45046 Canola mitochondrion 35.71 52.97
CDY16426 Canola cytosol 44.29 52.19
CDY31050 Canola mitochondrion 56.0 51.99
KRH61467 Soybean mitochondrion 56.57 51.56
CDY20661 Canola mitochondrion 55.14 51.19
CDY27928 Canola cytosol 15.43 49.54
CDY22959 Canola cytosol 43.43 48.41
CDY28146 Canola cytosol 49.14 47.91
CDY03585 Canola cytosol 48.86 47.63
CDY03586 Canola plastid 47.71 46.39
CDY51693 Canola cytosol 47.71 46.39
CDY24619 Canola cytosol 47.71 46.39
CDX82281 Canola cytosol 47.14 45.83
GSMUA_Achr3P15170_001 Banana mitochondrion 49.71 45.55
GSMUA_Achr8P26500_001 Banana mitochondrion 49.71 45.55
CDY71328 Canola cytosol, peroxisome, plastid 19.71 44.81
KRH52160 Soybean endoplasmic reticulum, plasma membrane, plastid 57.14 43.29
CDY63740 Canola cytosol 56.0 43.27
TraesCS4A01G059800.1 Wheat mitochondrion 49.14 43.11
CDY57926 Canola cytosol 55.71 42.95
CDX99513 Canola mitochondrion 7.43 42.62
CDY68801 Canola plastid 49.14 41.85
CDX83089 Canola plastid 49.43 41.79
CDY08161 Canola endoplasmic reticulum 48.86 41.71
TraesCS4D01G236800.1 Wheat mitochondrion 47.43 41.6
TraesCS4B01G235400.3 Wheat mitochondrion 47.43 41.6
OQU92960 Sorghum mitochondrion 48.86 41.01
Os03t0231600-01 Rice mitochondrion 48.0 40.48
Zm00001d028303_P003 Maize mitochondrion, plastid 47.14 39.29
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 48.29 38.15
CDY22953 Canola cytosol, peroxisome, plastid 10.86 37.62
CDY66609 Canola cytosol 48.29 34.99
CDY54321 Canola mitochondrion 48.86 34.76
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1GO:A0A078JBZ3UniProt:A0A078JBZ3
InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY63741
ProteinID:CDY63741ProteinID:CDY63741.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058GO:GO:0009081GO:GO:0009082
GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00039593001
PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF5MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0004EDD122SEG:seg::
Description
BnaC05g07800DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078JBZ3]
Coordinates
chrLK034345:-:9115..14497
Molecular Weight (calculated)
38251.0 Da
IEP (calculated)
7.380
GRAVY (calculated)
-0.116
Length
350 amino acids
Sequence
(BLAST)
001: MALRCLSQSS TTLFYLSNIC GFRMHGTKAA VSVVEEHVSK MVGTGREDEE YADVDWDNLG FKKETSNKGL IEGMKAYRGE DGRVLLFRPE LNAVRMKKGA
101: ERMCMHSPSV QQFIEGVKQT VLANRRWVPP PGKGSLYLRP LLFGSGASLG LSAASEFTFL VFGSPVQNYF KEGTSALNLY VEEVIPRAYL GGSGGVKSIS
201: NYGPVLEVMR RAKARGFSDV LYLDAETKKN MEEVSASNIF LVKGNTIVTP ATNGTILGGI TRKSVIEIAI DLGYKVEERV VPVEELKEAE EVFCTGTATG
301: VASVGSITFQ NTRTEYKVGD GLVTQQLRSI LVGIQTGSIQ DTKNWVLEID
Best Arabidopsis Sequence Match ( AT1G10060.5 )
(BLAST)
001: MYSQSPIDIF EGIFVVTYKS WLRNLNTEKE NASNFPSSLY IFQPLSVSLP LCSFSNIFFR VGTTSLIIIF STPINKRYIL EFHFGAQTKL VQHSSYMALR
101: RCLPQYSTTS SYLSKIWGFR MHGTKAAASV VEEHVSGAER EDEEYADVDW DNLGFSLVRT DFMFATKSCR DGNFEQGYLS RYGNIELNPA AGILNYGQGL
201: IEGMKAYRGE DGRVLLFRPE LNAMRMKIGA ERMCMHSPSV HQFIEGVKQT VLANRRWVPP PGKGSLYLRP LLFGSGASLG VAAASEYTFL VFGSPVQNYF
301: KEGTAALNLY VEEVIPRAYL GGTGGVKAIS NYGPVLEVMR RAKSRGFSDV LYLDADTGKN IEEVSAANIF LVKGNTIVTP ATSGTILGGI TRKSIIEIAL
401: DLGYKVEERS VPVEELKEAE EVFCTGTAAG VASVGSITFK NTRTEYKVGD GIVTQQLRSI LVGIQTGSIQ DTKDWVLQIA
Arabidopsis Description
ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.