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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45046 Canola mitochondrion 63.23 96.19
CDY28146 Canola cytosol 94.43 94.43
CDY69091 Canola mitochondrion, peroxisome, plastid 45.13 89.01
AT1G50110.1 Thale cress cytosol 86.35 87.08
CDY03586 Canola plastid 85.52 85.28
CDY03587 Canola cytosol 38.44 82.14
CDY12427 Canola cytosol 38.44 82.14
CDY45047 Canola peroxisome 38.16 82.04
CDY16426 Canola cytosol 61.84 74.75
CDY71328 Canola cytosol, peroxisome, plastid 30.64 71.43
CDY22953 Canola cytosol, peroxisome, plastid 19.78 70.3
CDY27928 Canola cytosol 20.61 67.89
CDY22959 Canola cytosol 57.1 65.29
CDY51693 Canola cytosol 64.62 64.44
CDX82281 Canola cytosol 64.07 63.89
CDY24619 Canola cytosol 63.79 63.61
KRH49893 Soybean cytosol 62.12 62.29
KRH42010 Soybean cytosol 60.72 61.24
KRH49895 Soybean cytosol 60.45 60.45
KRH42008 Soybean cytosol 60.17 58.38
CDY31051 Canola mitochondrion 44.85 55.33
KRH42003 Soybean cytosol 50.42 54.03
GSMUA_Achr3P15170_001 Banana mitochondrion 55.71 52.36
CDY66609 Canola cytosol 69.92 51.97
TraesCS4A01G059800.1 Wheat mitochondrion 56.82 51.13
TraesCS4D01G236800.1 Wheat mitochondrion 56.82 51.13
GSMUA_Achr8P26500_001 Banana mitochondrion 54.32 51.05
CDY31050 Canola mitochondrion 53.48 50.93
CDY20662 Canola mitochondrion 48.47 50.43
TraesCS4B01G235400.3 Wheat mitochondrion 55.99 50.38
Os03t0231600-01 Rice mitochondrion 58.22 50.36
CDY20661 Canola mitochondrion 52.65 50.13
CDY63741 Canola mitochondrion 47.63 48.86
CDX83089 Canola plastid 55.43 48.07
OQU92960 Sorghum mitochondrion 55.71 47.96
CDY68801 Canola plastid 54.6 47.69
CDY57927 Canola mitochondrion 51.81 47.45
Zm00001d028303_P003 Maize mitochondrion, plastid 54.87 46.9
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 57.66 46.73
CDX99513 Canola mitochondrion 7.8 45.9
CDY08161 Canola endoplasmic reticulum 52.09 45.61
CDY57926 Canola cytosol 55.15 43.61
CDY63740 Canola cytosol 54.6 43.27
CDY54321 Canola mitochondrion 55.43 40.45
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1GO:A0A078ENT2InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY03585ProteinID:CDY03585
ProteinID:CDY03585.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150GO:GO:0008152
GO:GO:0009081GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655GO:GO:0052656
EnsemblPlantsGene:GSBRNA2T00116327001PFAM:PF01063PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF4
MetaCyc:PWY-5057MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104
MetaCyc:PWY-5108SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI0004EF3188SEG:seg:
Description
BnaC03g68440D
Coordinates
chrLK031944:-:613004..614996
Molecular Weight (calculated)
39147.0 Da
IEP (calculated)
6.402
GRAVY (calculated)
-0.147
Length
359 amino acids
Sequence
(BLAST)
001: MAPSVQPSSS PLRTSKGDDK YANVKWEELG FSLIPTDCMY VAKCRQGESF TEGKIVPYGD ISISPCCPIL NYGQGLFEGL KAYRTEDDRI LIFRPHENAL
101: RMQDGAERLC MAPPSVEFFV EAVKQTVLAN KKWVPPPGKG ALYIRPLLIG SGAILGVAPA PEYTFLIYAS PVGDYHKASS GLNLRVDHKS HRAHSGGTGG
201: VKSCTNYSPV VKSLVEAKSS GFSDVLFLDA ATGRNIEEAS ACNIFIVKGN IVSTPPTSGT ILPGITRKSI SELARDIGYQ VQERDVSVEE LLEAEEVFCT
301: GTAMVVKAVE TVTFHDKKIK YRTGEEALST KLHLMLTNIQ MGIVEDKKSW MVEINGCDE
Best Arabidopsis Sequence Match ( AT1G50110.1 )
(BLAST)
001: MAPSSSPLRT TSETDEKYAN VKWEELGFAL TPIDYMYVAK CRQGESFTQG KIVPYGDISI SPCSPILNYG QGLFEGLKAY RTEDDRIRIF RPDQNALRMQ
101: TGAERLCMTP PTLEQFVEAV KQTVLANKKW VPPPGKGTLY IRPLLLGSGA TLGVAPAPEY TFLIYASPVG DYHKVSSGLN LKVDHKYHRA HSGGTGGVKS
201: CTNYSPVVKS LLEAKSAGFS DVLFLDAATG RNIEELTACN IFIVKGNIVS TPPTSGTILP GVTRKSISEL AHDIGYQVEE RDVSVDELLE AEEVFCTGTA
301: VVVKAVETVT FHDKKVKYRT GEAALSTKLH SMLTNIQMGV VEDKKGWMVD IDPCQG
Arabidopsis Description
BCAT6Branched-chain-amino-acid aminotransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.