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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022448.1-P Field mustard cytosol 98.33 98.33
CDY24619 Canola cytosol 95.83 95.83
CDX82281 Canola cytosol 95.28 95.28
CDY22959 Canola cytosol 82.22 94.27
CDY22953 Canola cytosol, peroxisome, plastid 25.83 92.08
AT3G19710.1 Thale cress cytosol 78.06 79.38
CDY71328 Canola cytosol, peroxisome, plastid 27.78 64.94
CDY03585 Canola cytosol 64.44 64.62
CDY28146 Canola cytosol 63.33 63.51
CDY03586 Canola plastid 62.22 62.22
CDY69091 Canola mitochondrion, peroxisome, plastid 30.56 60.44
CDY45046 Canola mitochondrion 39.44 60.17
CDY16426 Canola cytosol 48.61 58.92
KRH49893 Soybean cytosol 57.78 58.1
CDY45047 Canola peroxisome 26.67 57.48
CDY12427 Canola cytosol 26.67 57.14
CDY03587 Canola cytosol 26.67 57.14
KRH42010 Soybean cytosol 56.11 56.74
KRH49895 Soybean cytosol 55.28 55.43
CDY31051 Canola mitochondrion 43.33 53.61
KRH42008 Soybean cytosol 54.44 52.97
KRH42003 Soybean cytosol 49.17 52.84
GSMUA_Achr3P15170_001 Banana mitochondrion 53.33 50.26
GSMUA_Achr8P26500_001 Banana mitochondrion 51.67 48.69
CDY27928 Canola cytosol 14.72 48.62
CDY31050 Canola mitochondrion 50.83 48.54
CDY63741 Canola mitochondrion 46.39 47.71
TraesCS4D01G236800.1 Wheat mitochondrion 52.78 47.62
CDY20662 Canola mitochondrion 45.56 47.54
CDY20661 Canola mitochondrion 49.17 46.95
TraesCS4A01G059800.1 Wheat mitochondrion 51.94 46.87
TraesCS4B01G235400.3 Wheat mitochondrion 51.94 46.87
Os03t0231600-01 Rice mitochondrion 53.89 46.75
OQU92960 Sorghum mitochondrion 53.33 46.04
CDY57927 Canola mitochondrion 49.72 45.66
Zm00001d028303_P003 Maize mitochondrion, plastid 51.94 44.52
CDY68801 Canola plastid 50.56 44.28
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 53.61 43.57
CDX83089 Canola plastid 50.0 43.48
CDY08161 Canola endoplasmic reticulum 48.06 42.2
CDY66609 Canola cytosol 55.83 41.61
CDY63740 Canola cytosol 50.28 39.96
CDY57926 Canola cytosol 50.0 39.65
CDY54321 Canola mitochondrion 50.28 36.79
CDX99513 Canola mitochondrion 6.11 36.07
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1MapMan:9.5.1.1GO:A0A078IRH1
UniProt:A0A078IRH1InterPro:Aminotrans_IVInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY51693
ProteinID:CDY51693ProteinID:CDY51693.1GO:GO:0003674GO:GO:0003824GO:GO:0004084GO:GO:0008150
GO:GO:0008152GO:GO:0009081GO:GO:0009987GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00004033001PFAM:PF01063
PIRSF:PIRSF006468PANTHER:PTHR42825PANTHER:PTHR42825:SF4MetaCyc:PWY-5057MetaCyc:PWY-5076MetaCyc:PWY-5078
MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108SUPFAM:SSF56752TIGRFAMs:TIGR01123
UniParc:UPI0004EF4A06SEG:seg::::
Description
BnaA05g36800DBnaA05g36800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRH1]
Coordinates
chrLK033019:+:50076..52813
Molecular Weight (calculated)
39483.6 Da
IEP (calculated)
8.529
GRAVY (calculated)
-0.099
Length
360 amino acids
Sequence
(BLAST)
001: MAPSAQSLPT SVSDEKYANV KWEELGFGFC RTDNMYVAKC KHGESFQEGK IVPYADIQIS PCSAVLNYGQ GLYEGLKAYR TEDGRIVLFR PDQNALRLQS
101: GANRLCMPYP TVDQFVSAVK QVVLANKKWI PPPGRGTLYI RPILFGSGPI LGSLPVPEYT FTVFACPVGR YHKDNAGLNL KIEDKFRRAF PSGTGGVKSI
201: TNYSPVWITL AEAKAKGFSD VLFLDAATGK NVEELFASNV FIVKGNVVST PEISGTILPG VTRKSVIELT RDFGYKVEER VVPVEDLLDA EEVFCTGTAA
301: IVTTIASVTF KEKKTEFKTG DKTLAAKLFA TLTDIHMGRV EDKKGWIVEL TDATKPGLKL
Best Arabidopsis Sequence Match ( AT3G19710.1 )
(BLAST)
001: MAPSAQPLPV SVSDEKYANV KWEELAFKFV RTDYMYVAKC NHGESFQEGK ILPFADLQLN PCAAVLQYGQ GLYEGLKAYR TEDGRILLFR PDQNGLRLQA
101: GADRLYMPYP SVDQFVSAIK QVALANKKWI PPPGKGTLYI RPILFGSGPI LGSFPIPETT FTAFACPVGR YHKDNSGLNL KIEDQFRRAF PSGTGGVKSI
201: TNYCPVWIPL AEAKKQGFSD ILFLDAATGK NIEELFAANV FMLKGNVVST PTIAGTILPG VTRNCVMELC RDFGYQVEER TIPLVDFLDA DEAFCTGTAS
301: IVTSIASVTF KDKKTGFKTG EETLAAKLYE TLSDIQTGRV EDTKGWTVEI DRQG
Arabidopsis Description
BCAT4Methionine aminotransferase BCAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE06]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.